| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1254826 | 49 (0.880) | 4 (0.080) | 4/240 | NT | 7.6% | coding (675/2040 nt) | metG | methionine‑‑tRNA ligase |
| ? | NC_002947 | = 1254866 | 52 (1.000) | coding (635/2040 nt) | metG | methionine‑‑tRNA ligase | |||||
GAAGTCCAGCTCCGGGCGGCGTGCGCAGAGGTTCTTGAAGCTGGCCATGTAGCCGATTGGTGCATCCAGCCATACGTAGAAGTATTTGCCAGGCTCGCCCGGGATCTCGAAGCCGAAGTACGGCGCGTCGCGGGAGATATCCCACTCCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1254673‑1254826‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcaggACGCGGTAGCCAACAAGCTGGCGGAATGGCTGGACTCCGGCCTGCAGGAGTGGGATATCTCCCGCGACGCGCCGTACTTCGGCTTCGAGATCCCGGGCGAGCCTGGCAAATACTTCTACGTATGGCTGGATGCACCAATCGGCTA < NC_002947/1254866‑1254722 GAAGTCCAGCTCCGGGCGGCGTGCGCAGAGGTTCTTGAAGCTGGCCATGTAGCCGATTGGTGCATCCAGCCATACGTAGAAGTATTTGCCAGGCTCGCCCGGGATCTCGAAGCCGAAGTACGGCGCGTCGCGGGAGATATCCCACTCCT > 6:218766/1‑149 CAGAGGTTCTTGAAGCTGGCCATGTAGCCGATTGGTGCATCCAGCCATACGTAGAAGTATTTGCCAGGCTCGCCCGGGATCTCGAAGCCGAAGTACGGCGCGTCGCGGGAGATATCCCACTCCTGCAGG > 1:298800/1‑129 CAGAGGTTCTTGAAGCTGGCCATGTAGCCGATTGGTGCATCCAGCCATACGTAGAAGTATTTGCCAGGCTCGCCCGGGATCTCGAAGCCGAAGTACGGCGCGTCGCGGGAGATATCCCACTCCTGCAGG < 2:298800/129‑1 CAGAGGTTCTTGAAGCTGGCCATGTAGCCGATTGGTGCATCCAGCCATACGTAGAAGTATTTGCCAGGCTCGCCCGGGATCTCGAAGCCGAAGTACGGCGCGTCGCGGGAGATATCCCACTC < 3:142298/122‑1 CAGAGGTTCTTGAAGCTGGCCATGTAGCCGATTGGTGCATCCAGCCATACGTAGAAGTATTTGCCAGGCTCGCCCGGGATCTCGAAGCCGAAGTACGGCGCGTCGCGGGAGATATCCCACTC > 4:142298/1‑122 GCTGGCCATGTAGCCGATTGGTGCATCCAGCCATACGTAGAAGTATTTGCCAGGCTCGCCCGGGATCTCGAAGCCGAAGTACGGCGCGTCGCGGGAGATATCCCACTCCTGCAGGACGCGGTAGCCAACAAGCTGGCGGAATGGCTGGA > 1:317312/1‑149 GTAGCCGATTGGTGCATCCAGCCATACGTAGAAGTATTTGCCAGGCTCGCCCGGGATCTCGAAGCCGAAGTACGGCGCGTCGCGGGAGATATCCCACTCCTGCAGGACGCGGTAGCCAACAAGCTGGCGGAATGGCTGGACTCCGGC < 3:181989/147‑1 GTAGCCGATTGGTGCATCCAGCCATACGTAGAAGTATTTGCCAGGCTCGCCCGGGATCTCGAAGCCGAAGTACGGCGCGTCGCGGGAGATATCCCACTCCTGCAGGACGCGGTAGCCAACAAGCTGGCGGAATGGCTGGACTCCGGC > 4:181989/1‑147 CCGATTGGTGCATCCAGCCATACGTAGAAGTATTTGCCAGGCTCGCCCGGGATCTCGAAGCCGAAGTACGGCGCGTCGCGGGAGATATCCCACTCCTGCAGGACGCGGTAGCCAACAAGCTGGCGGAATGGCTGGACTCCGGCCTGCAG < 2:317312/149‑1 CCTGCAGGACGCGGTAGCCAACAAGCTGGCGGAATGGCTGGACTCCGGCCTGCAGGAGTGGGATATCTCCCGCGACGCGCCGTACTTCGGCTTC > 2:179998/1‑94 TGCAGGACGCGGTAGCCAACAAGCTGGCGGAATGGCTGGACTCCGGCCTGCAGGAGTGGGATATCTCCCGCGACGCGCCGTACTTCGGCTTCGAGATCCCGGGCGAGCCTGGCAAATACTTCTACGTATGGCTGGATGCACCAATCGGC > 6:220834/1‑149 CAGGACGCGGTAGCCAACAAGCTGGCGGAATGGCTGGACTCCGGCCTGCAGGAGTGGGATATCTCCCGCGACGCGCCGTACTTCGGCTTCGAGATCCCGGGCGAGCCTGGCAAATACTTCTACGTATGGCTGGATGCACCAATCGGCTA < 4:156160/149‑1 GAAGTCCAGCTCCGGGCGGCGTGCGCAGAGGTTCTTGAAGCTGGCCATGTAGCCGATTGGTGCATCCAGCCATACGTAGAAGTATTTGCCAGGCTCGCCCGGGATCTCGAAGCCGAAGTACGGCGCGTCGCGGGAGATATCCCACTCCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1254673‑1254826‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcaggACGCGGTAGCCAACAAGCTGGCGGAATGGCTGGACTCCGGCCTGCAGGAGTGGGATATCTCCCGCGACGCGCCGTACTTCGGCTTCGAGATCCCGGGCGAGCCTGGCAAATACTTCTACGTATGGCTGGATGCACCAATCGGCTA < NC_002947/1254866‑1254722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |