| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1354380 | 57 (1.030) | 3 (0.060) | 3/240 | NT | 5.5% | coding (997/2880 nt) | nrdA | ribonucleoside‑diphosphate reductase subunit alpha |
| ? | NC_002947 | = 1354407 | 50 (0.960) | coding (970/2880 nt) | nrdA | ribonucleoside‑diphosphate reductase subunit alpha | |||||
GACAGGTCGTCCGGCACGGTGGTCAGGTAGCAGCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1354229‑1354380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttcttcATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTGTCCAGCT < NC_002947/1354407‑1354260 GACAGGTCGTCCGGCACGGTGGTCAGGTAGCAGCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTC < 5:168091/149‑1 CTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTT < 1:164019/107‑1 CTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTT > 2:164019/1‑107 CGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACA < 2:31612/148‑1 AACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAA < 3:344049/91‑1 AACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAA > 4:344049/1‑91 TTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTG > 2:137590/1‑149 TTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGC < 3:286535/126‑1 TTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGC > 4:286535/1‑126 TCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCTGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTGTC < 2:71687/148‑1 CATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTGTCCAGCT > 5:126473/1‑149 GACAGGTCGTCCGGCACGGTGGTCAGGTAGCAGCTGGACAGCTGCGGGCGCAGGGTGCCGGCGTTGAACAGGGTCGGGGTCGAGGCCATGTAGTCGAACGACGACAACAGGTTGTAGAACTCGATCGCACGGGCTTCCTTGTCTTTTTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1354229‑1354380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttcttcATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCGTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCGCCCGCAGCTGTCCAGCT < NC_002947/1354407‑1354260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |