New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1447365 | 60 (1.080) | 6 (0.110) | 4/244 | NT | 9.1% | coding (1463/2178 nt) | PP_1264 | fusaric acid resistance protein |
? | NC_002947 | = 1447377 | 62 (1.180) | coding (1475/2178 nt) | PP_1264 | fusaric acid resistance protein |
CACCCAACCCCAAGCGCATGTCGTTCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1447215‑1447365 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcGACGAAAGAAAAGCGCCCAGCACGAACACGGGCGCCAGCACCATGCACAGCAGCGGGAAACCGTCGATCCAGGGGAACACGAAGAAGGTTTCGAAGAAGCCGACAAAAGCGCCGATGGCCGTGCCGCAAGCCATCTGGAACGAC < NC_002947/1447377‑1447234 CACCCAACCCCAAGCGCATGTCGTTCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGC > 7:99928/1‑149 ACCCAACCCCAAGCGCATGTCGTTCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCG > 3:222609/1‑149 CCCAACCCCAAGCGCATGTCGTTCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGC < 4:222609/149‑1 TCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCAGGGCGCGACGAAAGAAAAGCGCCCAGCA > 1:170547/1‑149 CAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCAGGGCGCGACGAAAGAAAAGCGCCCAGCAC < 2:170547/148‑1 CAGATGGCTTGCGGCACGGCCATCGGCGCCTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGCGACGAAAGAAAAGCGCCCAGCAC < 4:78337/148‑1 GCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGCGACGAAAGAAAAGCGCCCAGCAC > 3:48800/1‑111 GCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGCGACGAAAGAAAAGCGCCCAGCAC < 4:48800/111‑1 AAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGCGACGAAAGAAAAGCGCCCAGC < 6:159834/100‑1 GGCGCGACGAAAGAAAAGCGCCCAGCACGAACACGGGCGCCAGCACCATGCACAGCAGCGGGAAACCGTCGATCCAGGGGAACACGAAGAAGGTTTCGAAGAAGCCGACAAAAGCGCCGATGGCCGTGCCGCAAGCCATCTGGAACGAC < 2:263221/149‑1 CACCCAACCCCAAGCGCATGTCGTTCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1447215‑1447365 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcGACGAAAGAAAAGCGCCCAGCACGAACACGGGCGCCAGCACCATGCACAGCAGCGGGAAACCGTCGATCCAGGGGAACACGAAGAAGGTTTCGAAGAAGCCGACAAAAGCGCCGATGGCCGTGCCGCAAGCCATCTGGAACGAC < NC_002947/1447377‑1447234 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |