New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 144736560 (1.080)6 (0.110) 4/244 NT 9.1% coding (1463/2178 nt) PP_1264 fusaric acid resistance protein
?NC_002947 = 1447377 62 (1.180)coding (1475/2178 nt) PP_1264 fusaric acid resistance protein

CACCCAACCCCAAGCGCATGTCGTTCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1447215‑1447365
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcGACGAAAGAAAAGCGCCCAGCACGAACACGGGCGCCAGCACCATGCACAGCAGCGGGAAACCGTCGATCCAGGGGAACACGAAGAAGGTTTCGAAGAAGCCGACAAAAGCGCCGATGGCCGTGCCGCAAGCCATCTGGAACGAC  <  NC_002947/1447377‑1447234
                                                                                                                                                                                                                                                                                                       
CACCCAACCCCAAGCGCATGTCGTTCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGC                                                                                                                                                    >  7:99928/1‑149
 ACCCAACCCCAAGCGCATGTCGTTCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCG                                                                                                                                                   >  3:222609/1‑149
  CCCAACCCCAAGCGCATGTCGTTCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGC                                                                                                                                                  <  4:222609/149‑1
                        TCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCAGGGCGCGACGAAAGAAAAGCGCCCAGCA                                                                                                                            >  1:170547/1‑149
                          CAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCAGGGCGCGACGAAAGAAAAGCGCCCAGCAC                                                                                                                           <  2:170547/148‑1
                          CAGATGGCTTGCGGCACGGCCATCGGCGCCTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGCGACGAAAGAAAAGCGCCCAGCAC                                                                                                                           <  4:78337/148‑1
                                                               GCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGCGACGAAAGAAAAGCGCCCAGCAC                                                                                                                           >  3:48800/1‑111
                                                               GCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGCGACGAAAGAAAAGCGCCCAGCAC                                                                                                                           <  4:48800/111‑1
                                                                        AAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGCGACGAAAGAAAAGCGCCCAGC                                                                                                                             <  6:159834/100‑1
                                                                                                                                                  GGCGCGACGAAAGAAAAGCGCCCAGCACGAACACGGGCGCCAGCACCATGCACAGCAGCGGGAAACCGTCGATCCAGGGGAACACGAAGAAGGTTTCGAAGAAGCCGACAAAAGCGCCGATGGCCGTGCCGCAAGCCATCTGGAACGAC  <  2:263221/149‑1
                                                                                                                                                                                                                                                                                                       
CACCCAACCCCAAGCGCATGTCGTTCCAGATGGCTTGCGGCACGGCCATCGGCGCTTTTGTCGGCTTCTTCGAAACCTTCTTCGTGTTCCCCTGGATCGACGGTTTCCCGCTGCTGTGCATGGTGCTGGCGCCCGTGTTCGTGCTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1447215‑1447365
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcGACGAAAGAAAAGCGCCCAGCACGAACACGGGCGCCAGCACCATGCACAGCAGCGGGAAACCGTCGATCCAGGGGAACACGAAGAAGGTTTCGAAGAAGCCGACAAAAGCGCCGATGGCCGTGCCGCAAGCCATCTGGAACGAC  <  NC_002947/1447377‑1447234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.