New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1699744	44 (0.790)	4 (0.080)	4/242	NT	8.2%	coding (430/1008 nt)	PP_1494	GGDEF domain‑containing response regulator
	?	NC_002947	= 1699781	48 (0.920)					coding (467/1008 nt)	PP_1494	GGDEF domain‑containing response regulator

ATCGTCCTGTCGACCAAGGAAGACCCGCTGGTGAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTATCACTCGCGCTCCTACCTGACC‑‑‑‑‑‑‑‑‑CTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1699600‑1699744 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgcTGGCTGACGCGCAGGGCACGGTAGGCCTCGTCGCGCTGCAGCAGGGTCAGGTAGGAGCGCGAGTGATAACGGATGCGTGCCACCAGTTCGATGGTGTCAGGCAGCTTGACCAGGTAATCGTTGGCCCCGGCGGCAAATGCCGCACTCT  <  NC_002947/1699781‑1699634                                                                                                                                                                                                                                                                                                                ATCGTCCTGTCGACCAAGGAAGACCCGCTGGTGAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTATCACTCGCGCTCCTACCTGACC‑‑‑‑‑‑‑‑‑CTGCTGCTGGC                                                                                                                                                  >  1:15515/1‑149                                     AGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTATCACTCGCGCTCCTACCTGACC‑‑‑‑‑‑‑‑‑CTGC                                                                                                                                                         >  3:156887/1‑106                                     AGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTATCACTCGCGCTCCTACCTGACC‑‑‑‑‑‑‑‑‑CTGC                                                                                                                                                         <  4:156887/106‑1                                       TGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTATCACTCGCGCTCCTACCTGACC‑‑‑‑‑‑‑‑‑CTGCTGCTGGCTGACGCGCAGGGCACGGTAGGCCTCGTCGCGCTGCAG                                                                                                             >  4:60292/1‑148                                         CGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTATCACTCGCGCTCCTACCTGACC‑‑‑‑‑‑‑‑‑CTGCTGCTGGCTGACGCGCAGGGCACGGTAGGCCTCGTCGCGCTGCAGCAG                                                                                                          <  2:15515/149‑1                                            CATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTATCACTCGCGCTCCTACCTGACC‑‑‑‑‑‑‑‑‑CTGCTGCTGGCTGACGCGCAGGGCACGGTAGGCCTCGTCGCGCTGCAGCAGGGT                                                                                                       <  3:60292/149‑1                                                   CGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTATCACTCGCGCTCCTACCTGACCCTGCTGCAGCTGCTGCTGGCTGACGCGCAGGGCACGGTAGGCCTCGTCGCGCTGCAGCAGG                                                                                                         <  2:276824/149‑1                                                                                                                                                     TGCTGCTGGCTGACGCGCAGGGCACGGTAGGCCTCGTCGCGCTGCAGCAGGGTCAGGTAGGAGCGCGAGTGATAACGGATGCGTGCCACCAGTTCGATGGTGTCAGGCAGCTTGACCAGGTAATCGTTGGCCCCGGCGGCAAATGCCG        >  4:220899/1‑148                                                                                                                                                        TGCTGGCTGACGCGCAGGGCACGGTAGGCCTCGTCGCGCTGCAGCAGGGTCAGGTAGGAGCGCGAGTGATAACGGATGCGTGCCACCAGTTCGATGGTGTCAGGCAGCTTGACCAGGTAATCGTTGGCCCCGGCGGCAAATGCCGCACT    >  1:154310/1‑149                                                                                                                                                          CTGGCTGACGCGCAGGGCACGGTAGGCCTCGTCGCGCTGCAGCAGGGTCAGGTAGGAGCGCGAGTGATAACGGATGCGTGCCACCAGTTCGATGGTGTCAGGCAGCTTGACCAGGTAATCGTTGGCCCCGGCGGCATTTGCCGCcggg   <  2:175740/148‑5                                                                                                                                                          CTGGCTGACGCGCAGGGCACGGTAGGCCTCGTCGCGCTGCAGCAGGGTCAGGTAGGAGCGCGAGTGATAACGGATGCGTGCCACCAGTTCGATGGTGTCAGGCAGCTTGACCAGGTAATCGTTGGCCCCGGCGGCAAATGCCGCACTCT  <  5:167928/149‑1                                                                                                                                                          CTGGCTGACGCGCAGGGCACGGTAGGCCTCGTCGCGCTGCAGCAGGGTCAGGTAGGAGCGCGAGTGATAACGGATGCGTGCCACCAGTTCGATGGTGTCAGGCAGCTTGACCAGGTAATCGTTGGCCCCGGCGGCAAATGCCGCACTCT  <  6:318675/149‑1                                                                                                                                                                                                                                                                                                                ATCGTCCTGTCGACCAAGGAAGACCCGCTGGTGAAGAGTGCGGCATTTGCCGCCGGGGCCAACGATTACCTGGTCAAGCTGCCTGACACCATCGAACTGGTGGCACGCATCCGTTATCACTCGCGCTCCTACCTGACC‑‑‑‑‑‑‑‑‑CTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1699600‑1699744 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgcTGGCTGACGCGCAGGGCACGGTAGGCCTCGTCGCGCTGCAGCAGGGTCAGGTAGGAGCGCGAGTGATAACGGATGCGTGCCACCAGTTCGATGGTGTCAGGCAGCTTGACCAGGTAATCGTTGGCCCCGGCGGCAAATGCCGCACTCT  <  NC_002947/1699781‑1699634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.