New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1826340 =	62 (1.120)	4 (0.080)	4/244	NT	7.3%	coding (927/1092 nt)	PP_1627	hypothetical protein
	?	NC_002947	1826399 =	43 (0.810)					coding (986/1092 nt)	PP_1627	hypothetical protein

CCAGCGTGCGCATGTCCTCGATTGCCGAACGCCACCAGACCACCTTGCACGCGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1826398‑1826340 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggGCGGCTTCGACTGGAGCCGGGAGTGGCCTGAGGGGCTGCCGCGGCTGGGGCAGCGTGACGAACTGGCGTTCAGCGAAATCGCCCGGGCCAGCCTGAAAGTTTCCTGAGCCAGAGCCCGAAGCAGGGTGATAGGGTAGAGAGCCGCC  >  NC_002947/1826399‑1826544                                                                                                                                                                                                               CCAGCGTGCGCATGTCCTCGATTGCCGAACGCCACCAGACCACCTTGCACGCGCGCTGGGCGGCTTCGACTGGAGCCGGGAGTGGCCTGAGGGGCTGCCGCGGCTGGGGCAGCGTGACGAACTGGCGTTCAGCGAAATCGCCCGGGC                                                            >  8:30591/1‑147   AGCGTGCGCATGTCCTCGATTGCCGAACGCCACCAGACCACCTTGCACGCGCGCTGGGCGGCTTCGACTGGAGCCGGGAGTGGCCTGAGGGGCTGCCGCGGCTGGGGCAGCGTGACGAACTGGCGTTCAGCGAAATCGCCCGGGCCAGC                                                        >  5:111805/1‑149         CGCATGTCCTCGATTGCCGAACGCCACCAGACCACCTTGCACGCGCGCTGGGCGGCTTCGACTGGAGCCGGGAGTGGCCTGAGGGGCTGCCGCGGCTGGGGCAGCGTGACGAACTGGCGTTCAGCGAAATCGCCCGGGCCAGCCTGAAA                                                  <  7:30591/149‑1                                          ACCTTGCACGCGCGCTGGGCGGCTTCGACTGGAGCCGGGAGTGGCCTGAGGGGCTGCCGCGGCTGGGGCAGCGTGACGAACTGGCGTTCAGCGAAATCGCCCGGGCCAGCCTGAAAGTTTCCTGAGCCAGAGCCCGAAGCAGGGTGATA                 <  6:111805/149‑1                                                         TGGGCGGCTTCGACTGGAGCCGGGAGTGGCCTGAGGGGCTGCCGCGGCTGGGGCAGCGTGACGAACTGGCGTTCAGCGAAATCGCCCGGGCCAGCCTGAAAGTTTCCTGAGCCAGAGCCCGAAGCAGGGTGATAGGGTAGAGAGCCGCC  <  8:207374/149‑1                                                                                                                                                                                                               CCAGCGTGCGCATGTCCTCGATTGCCGAACGCCACCAGACCACCTTGCACGCGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1826398‑1826340 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggGCGGCTTCGACTGGAGCCGGGAGTGGCCTGAGGGGCTGCCGCGGCTGGGGCAGCGTGACGAACTGGCGTTCAGCGAAATCGCCCGGGCCAGCCTGAAAGTTTCCTGAGCCAGAGCCCGAAGCAGGGTGATAGGGTAGAGAGCCGCC  >  NC_002947/1826399‑1826544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.