New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1852407 =	73 (1.320)	7 (0.130)	5/240	NT	9.4%	coding (1493/2241 nt)	relA	ATP:GTP 3'‑pyrophosphotransferase
	?	NC_002947	1852449 =	66 (1.270)					coding (1535/2241 nt)	relA	ATP:GTP 3'‑pyrophosphotransferase

GGCGGTCTTGACGTTGGTCTTCTCGGCCAGGCGCTCGAAATCAACCTGCGGCAGGCCCAGACGACTGAGCTCGCGCTCAAGCAAGGTCTTGCCGGCAGCAACGTTCTGGTCGCGGGCCTGCAATTTGAACCAGTGGACGATCTTG‑‑‑‑‑‑GCCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1852558‑1852407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑g‑‑‑‑‑‑gcccgcgACCAGAACGTTGCTGCCGGCAAGACCTTGCTTGAGCGCGAGCTCAGTCGTCTGGGCCTGCCGCAGGTTGATTTCGAGCGCCTGGCCGAGAAGACCAACGTCAAGAC  >  NC_002947/1852449‑1852554                                                                                                                                                                                                                                                                          GGCGGTCTTGACGTTGGTCTTCTCGGACAGGCGCTCGAAATCAACCTGCGGCAGGCCCAGACGACTGAGCTCGCGCTCCAGCAAGGTCTTGCCTGCAGCAACGTTCTGGTCGCGGGCCTGCAATTTGAACCAGTGGACGATCTTG‑‑‑‑‑‑GCCC                                                                                                               >  6:277823/1‑149                                                                                                      CGTTCTGGTCGCGGGCCTGCAATTTGAACCAGTGGACGATCTTG‑‑‑‑‑‑GCCCGCGACCAGAACGTTGCTGCCGGCAAGACCTTGCTTGAGCGCGAGCTCAGTCGTCTGGGCCTGCCGCAGGTTGATTTCGAGCGCCTGGCCGAGAAGACCAAC          >  8:62756/1‑149                                                                                                       GTTCTGGTCGCGGGCCTGCAATTTGAACCAGTGGACGATCTTGGCCCGCGCCCGCGACCAGAACGTTGCTGCCGGCAAGACCTTGCTTGAGCGCGAGCTCAGTCGTCTGGGCCTGCCGCAGGTTGATTTCGAGCGCCTGGCCGAGAAGA               >  8:17218/1‑149                                                                                                       GTTCTGGTCGCGGGCCTGCAATTTGAACCAGTGGACGATCTTG‑‑‑‑‑‑GCCCGCGCCCAGAACGTTGCTGCCGGCAAGACCTTGCTTGAGCGCGAGCTCAGTCGTCTGGGCCTGCCGCAGGTTGATTTCGAGCGCCTGGCCGAGAAGACCAAC          <  7:210848/148‑1                                                                                                       GTTCTGGTCGCGGGCCTGCAATTTGAACCAGTGGACGATCTTG‑‑‑‑‑‑GCCCGCGCCCAGAACGTTGCTGCCGGCAAGACCTTGCTTGAGCGCGAGCTCAGTCGTCTGGGCCTGCCGCAGGTTGATTTCGAGCGCCTGGCCGAGAAGACCAAC          >  8:210848/1‑148                                                                                                              TCGCGGGCCTGCAATTTGAACCAGTGGACGATCTTG‑‑‑‑‑‑GCCCGCGACCAGAACGTTGCTGCCGGCAAGACCTTGCTTGAGCGCGAGCTCAGTCGTCTGGGCCTGCCGCAGGTTGATTTCGAGCGCCTGGCCGAGAAGACCAACGTCAAGAC  >  5:317931/1‑149                                                                                                              TCGCGGGCCTGCAATTTGAACCAGTGGACGATCTTG‑‑‑‑‑‑GCCCGCGACCAGAACGTTGCTGCCGGCAAGACCTTGCTTGAGCGCGAGCTCAGTCGTCTGGGCCTGCCGCAGGTTGATTTCGAGCGCCTGGCCGAGAAGA               >  1:257395/1‑136                                                                                                              TCGCGGGCCTGCAATTTGAACCAGTGGACGATCTTG‑‑‑‑‑‑GCCCGCGACCAGAACGTTGCTGCCGGCAAGACCTTGCTTGAGCGCGAGCTCAGTCGTCTGGGCCTGCCGCAGGTTGATTTCGAGCGCCTGGCCGAGAAGA               <  2:257395/136‑1                                                                                                                                                                                                                                                                          GGCGGTCTTGACGTTGGTCTTCTCGGCCAGGCGCTCGAAATCAACCTGCGGCAGGCCCAGACGACTGAGCTCGCGCTCAAGCAAGGTCTTGCCGGCAGCAACGTTCTGGTCGCGGGCCTGCAATTTGAACCAGTGGACGATCTTG‑‑‑‑‑‑GCCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1852558‑1852407 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑g‑‑‑‑‑‑gcccgcgACCAGAACGTTGCTGCCGGCAAGACCTTGCTTGAGCGCGAGCTCAGTCGTCTGGGCCTGCCGCAGGTTGATTTCGAGCGCCTGGCCGAGAAGACCAACGTCAAGAC  >  NC_002947/1852449‑1852554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.