New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2084896	72 (1.300)	4 (0.080)	3/244	NT	5.6%	coding (81/852 nt)	PP_1863	LysR family transcriptional regulator
	?	NC_002947	= 2084924	67 (1.270)					coding (53/852 nt)	PP_1863	LysR family transcriptional regulator

CGCCGGGCATACCCCAGCAGTACCTGGCCTTCGGCGGTCAGCCGCACCTGACGGCCATCACGTTCGAATAGCTGGCGCTGCAGAATGTCTTCTTCCAGGCGTTTCATCTGCATGCTGACCGCTGACTGGGTGCGGTTGACCACTTCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2084747‑2084896 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccaTTGCCGAGCAAGGCGGCTTTACCCGCGCTGGCGAAGTGGTCAACCGCACCCAGTCAGCGGTCAGCATGCAGATGAAACGCCTGGAAGAAGACATTCTGCAGCGCCAGCTATTCGAACGTGATGGCCGTCAGGTGCGGCTGACCGC  <  NC_002947/2084924‑2084780                                                                                                                                                                                                                                                                                                         CGCCGGGCATACCCCAGCAGTACCTGGCCTTCGGCGGTCAGCCGCACCTGACGGCCATCACGTTCGACTAGCTGGCGCTGCAGAATGTCTTCTTCCAGGCGTTTCATCTGCATGCTGACCGCTGACTGGGTGCGGTTGACCACTTCGC                                                                                                                                                     <  4:228929/148‑1                                      TCAGCCGCACCTGACGTCCATCACGTTCTAATAGCTGGCGCTGCAGACTGTCTTCTTCCAGGTGTTTCATCTGCATGCTGAGCGCTGAGTGGGTGCGGTTGACCACTTCGCCATTGCCGAGCAAGGCGGCTTTACCCGCGCTGGCGAAG                                                                                                               <  6:87349/149‑1                                      TCAGCCGCACCTGACGGCCATCACGTTCTAATAGCTGGCGCTGCAGAATGTCTTCTTCCAGGCGTTTCATCTGCATGCTGACCGCTGACTGGGTGCGGTTGACCACTTCGCCATTGCCGAGCAAGGCGGCTTTACCCGCGCTGGCGAAG                                                                                                               <  6:92432/149‑1                                                       CCATCACGTTCGAATAGCTGGCGCTGCAGAATGTCTTCTTCCAGGCGTTTCATCTGCATGCTGACCGCTGACTGGGTGCGGTTGACCACTTCGCCATTGCCGAGCAAGGCGGCTTTACCCGCGCTGGCGAA                                                                                                                <  7:20796/131‑1                                                       CCATCACGTTCGAATAGCTGGCGCTGCAGAATGTCTTCTTCCAGGCGTTTCATCTGCATGCTGACCGCTGACTGGGTGCGGTTGACCACTTCGCCATTGCCGAGCAAGGCGGCTTTACCCGCGCTGGCGAA                                                                                                                >  8:20796/1‑131                                                                                                                                                   GCCATTGCCGAGCAAGGCGGCTTTACCCGCGCTGGCGAAGTGGTCAACCGCACCCAGTCAGCGGTCAGCATGCAGATGAAACGCCTGGAAGAAGACATTCTGCAGCGCCAGCTATTCGAACGTGATGGCCGTCAGGTGCGGCTGACCGC  >  3:87970/1‑149                                                                                                                                                   GCCATTGCCGAGCAAGGCGGCTTTACCCGCGCTGGCGAAGTGGTCAACCGCACCCAGTCAGCGGTCAGCATGCAGATGAAACGCCTGGAAGAAGACATTCTGCAGCGCCAGCTATTCGAACGTGATGGCCGTCAGGTGCGGCTGACCGC  <  7:147560/149‑1                                                                                                                                                                                                                                                                                                         CGCCGGGCATACCCCAGCAGTACCTGGCCTTCGGCGGTCAGCCGCACCTGACGGCCATCACGTTCGAATAGCTGGCGCTGCAGAATGTCTTCTTCCAGGCGTTTCATCTGCATGCTGACCGCTGACTGGGTGCGGTTGACCACTTCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2084747‑2084896 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccaTTGCCGAGCAAGGCGGCTTTACCCGCGCTGGCGAAGTGGTCAACCGCACCCAGTCAGCGGTCAGCATGCAGATGAAACGCCTGGAAGAAGACATTCTGCAGCGCCAGCTATTCGAACGTGATGGCCGTCAGGTGCGGCTGACCGC  <  NC_002947/2084924‑2084780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.