New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2086080 = | NA (NA) | 4 (0.080) | 4/246 | NT | NA | coding (195/1302 nt) | PP_1865 | transposase |
? | NC_002947 | 2086120 = | NA (NA) | coding (235/1302 nt) | PP_1865 | transposase |
TGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086232‑2086080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC > NC_002947/2086120‑2086267 TGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTCTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGC > 5:210609/1‑149 GCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTG > 5:246795/1‑149 GCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCT < 4:8768/148‑1 CTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGC > 1:6005/1‑149 TGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGC > 6:77597/1‑148 GCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGC > 1:130464/1‑147 GCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGC > 4:172778/1‑147 cactAACTTGCCAATCAGGAATCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGAGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGC < 1:326586/132‑1 CCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGCCAGGTTCGGTTCTACTGATCTTTTCGTACAGAGCTGC > 2:326586/1‑136 GCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTG > 2:158463/1‑133 GCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTG < 1:158463/133‑1 AACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGA > 4:166400/1‑149 AGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGG > 7:167168/1‑149 CTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCG > 6:188868/1‑149 CTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCG > 1:162730/1‑149 TGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGT > 2:323434/1‑149 TGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTG > 2:222409/1‑143 TGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTG < 1:222409/143‑1 TGCCCTGTTGCCTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCAATCAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGAGGTCGATGGCAGCCACTAGGCCTCTACCGAAAAGCGTCTTGGCGCGT > 1:169083/1‑149 GCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTT > 3:147184/1‑149 GCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTG < 2:319129/89‑1 GCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTG > 1:319129/1‑89 CCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCaac < 7:109070/148‑4 CCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGG < 8:325983/109‑1 CCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC < 5:346464/149‑1 CCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC > 1:100796/1‑149 CCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC > 6:249390/1‑149 CCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC > 6:5813/1‑149 TGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086232‑2086080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC > NC_002947/2086120‑2086267 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |