New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2086243 =	NA (NA)	8 (0.150)	6/240	NT	NA	coding (358/1302 nt)	PP_1865	transposase
	?	NC_002947	2086305 =	NA (NA)					coding (420/1302 nt)	PP_1865	transposase

CAGCAACGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2086398‑2086243 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttcggtGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCACGCTG  >  NC_002947/2086305‑2086452                                                                                                                                                                                                                                                                                                                     CAGCAACGGCAAAACACAAACTCGTTAGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCT                                                                                                                                                                >  3:171345/1‑149  AGCAACGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTT                                                                                                                                                               <  2:207830/149‑1    CAACGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGTAGGTCAATTACCTGATCCAGGTCGGGGTCGTAGACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTT                                                                                                                                                             <  6:82643/149‑1    CAACGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTT                                                                                                                                                             <  5:104914/149‑1    CAACGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTT                                                                                                                                                             <  6:290914/149‑1    CAACGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTT                                                                                                                                                             <  5:245804/149‑1    CAACGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTT                                                                                                                                                             <  6:181950/149‑1    CAACGGCAAAAAACAAAGTCGTTCGCTGGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAGACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTT                                                                                                                                                             <  6:77439/149‑1     AACGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCATGTCGGGGTCGTAAACAACCAACGAAAACCCGGCGCGAGCCGCTCCCCGCTCTAGGCGCAACGCGCCAAGACACTTTTC                                                                                                                                                            >  8:60341/1‑149     AACGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTC                                                                                                                                                            >  6:275837/1‑149      ACGGCAAAACCCAAACTCGGTCGCTTGCGTAGGCGGCCTCGCAGGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCG                                                                                                                                                           <  5:177176/149‑1      ACGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCG                                                                                                                                                           >  3:243280/1‑149       CGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGG                                                                                                                                                          <  4:256289/149‑1        GGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGT                                                                                                                                                         <  3:322738/149‑1        GGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGT                                                                                                                                                         >  5:239858/1‑149          CAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGG                                                                                                                                                          >  2:1543/1‑146          CAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGG                                                                                                                                                          >  3:169482/1‑146          CAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCG                                                                                                                                                           >  3:21171/1‑145          CAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCG                                                                                                                                                           <  4:21171/145‑1                                  GTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGG                                                                                                                                                          <  2:81819/122‑1                                  GTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGG                                                                                                                                                          >  1:81819/1‑122                                             CGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTT                                                                                                                                                               >  6:213554/1‑106                                             CGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTT                                                                                                                                                               <  5:213554/106‑1                                                                                                CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCG                                                              >  2:111734/1‑149                                                                                                CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGC                                                                <  1:121306/147‑1                                                                                                CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGC                                                                >  2:121306/1‑147                                                                                                CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTG                                                                                                                      <  5:256319/96‑1                                                                                                CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTG                                                                                                                      >  6:256319/1‑96                                                                                                 CGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGT                                                             >  1:185209/1‑149                                                                                                                            CTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGG                                  <  2:185209/149‑1                                                                                                                                   CGCAACGCGCCAAGACGCTTTTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGGTCCTCGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTG                              <  1:111734/149‑1                                                                                                                                                     TTTTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCC                                                                                            >  5:354937/1‑66                                                                                                                                                     TTTTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCC                                                                                            <  6:354937/66‑1                                                                                                                                                      TTTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTCCGCAAGCGAACTAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTG         >  6:287781/1‑148                                                                                                                                                       TTCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGC        <  1:340683/148‑1                                                                                                                                                        TCGGTGGTGGTTTACGACCCCGACCTGGTTCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCAC      >  1:203092/1‑149                                                                                                                                                        TCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCA       <  3:94990/148‑1                                                                                                                                                        TCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCA       <  8:49783/148‑1                                                                                                                                                        TCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTT                                <  7:309037/123‑1                                                                                                                                                        TCGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTT                                >  8:309037/1‑123                                                                                                                                                         CGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCAC      <  7:309879/148‑1                                                                                                                                                         CGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAA                                             <  3:98563/109‑1                                                                                                                                                         CGGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAA                                             >  4:98563/1‑109                                                                                                                                                          GGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCACGC    >  4:40497/1‑149                                                                                                                                                          GGTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCACGC    >  7:334929/1‑149                                                                                                                                                           GTGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGGTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCACGCT   <  8:28128/149‑1                                                                                                                                                            TGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCACGCTG  >  1:171470/1‑149                                                                                                                                                            TGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCACGCTG  <  3:89282/149‑1                                                                                                                                                            TGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCACGCTG  >  8:61357/1‑149                                                                                                                                                            TGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGAACGCTG  >  8:54712/1‑149                                                                                                                                                            TGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCATGCTGAAGCAAAGACCAATCAGGTATGGATCGCTGACCGTCTCTACTGCACGCTG  >  5:352658/1‑149                                                                                                                                                                                                                                                                                                                     CAGCAACGGCAAAACACAAACTCGTTCGCTTGCGTAGGCGTCCTCGCACGGCTGGAGGTCAATTACCTGATCCAGGTCGGGGTCGTAAACCACCACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2086398‑2086243 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttcggtGGTGGTTTACGACCCCGACCTGGATCAGGTAATTGACCTCCAGCCGTGCGAGG‑‑‑ACGCCTACGCAAGCGAACGAGTTTGTGTTTTGCCGTTGCTGGCTGAAGCAAAGACCAATCAGGTTTGGATCGCTGACCGTCTCTACTGCACGCTG  >  NC_002947/2086305‑2086452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.