| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2086546 = | NA (NA) | 3 (0.060) | 3/248 | NT | NA | coding (661/1302 nt) | PP_1865 | transposase |
| ? | NC_002947 | 2086577 = | NA (NA) | coding (692/1302 nt) | PP_1865 | transposase | |||||
ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086697‑2086546‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCT > NC_002947/2086577‑2086723 ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG > 2:266327/1‑149ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG > 3:153701/1‑149ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG > 8:22006/1‑149 TGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT < 8:53223/149‑1 TGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGCTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT < 5:225878/149‑1 GCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTG > 8:27661/1‑149 CTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC < 5:10506/149‑1 TCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTG > 6:127647/1‑145 TCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTG < 5:127647/145‑1 TTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG < 2:86202/82‑1 TTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG > 1:86202/1‑82 TCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCC > 3:51879/1‑148 GCGCACAGTGCCTGTGGCGACGGGCATCGGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTT < 5:270431/85‑1 GCGCACAGTGCCTGTGGCGACGGGCATCGGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTT > 6:270431/1‑85 GTGCGCGAGCAATCCATCGAAGTAAAAGCCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACT > 1:199233/1‑148 ttCGCGAGCAATCCATCTAAGTAAAAGTCGGTAACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGAATCATGTGATAACAGCTTGATGTTGTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACT < 7:145398/145‑1 TGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTC < 3:319956/149‑1 TGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACT < 7:150005/147‑1 TGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGC > 7:177356/1‑122 TGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGC < 8:177356/122‑1 CGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCT < 6:212933/148‑1 CGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCT < 3:274886/148‑1 CGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTT < 7:36760/146‑1 CGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTT > 8:36760/1‑146 ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086697‑2086546‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCT > NC_002947/2086577‑2086723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |