| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2143357 = | 62 (1.120) | 4 (0.080) | 4/244 | NT | 6.3% | coding (137/435 nt) | PP_1899 | ExbD/TolR family protein |
| ? | NC_002947 | 2143402 = | 60 (1.140) | coding (182/435 nt) | PP_1899 | ExbD/TolR family protein | |||||
GACTCGCGCTCTATGGCCTCGCTCAGGGTGGCCAGGTCGCTTTTGGGCAGCAGGTGGTTGTTCACCGAATACACGCCTTCGGCGCTGATGGTGATTTCCACCAGCTTGCCCGGGTCGGCCGGCGCCGGCTCGGCGCTGGTGGCTTCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2143507‑2143357‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcaAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGAGCGAGGCCATAGAGCGCGAGTCGGGCGGC > NC_002947/2143402‑2143514 GACTCGCGCTCTATGGCCTCGCTCAGGGTGGCCAGGTCGGTTTTGGGCAGCAGGTGGTTGTTCACCGAATACACGCCTTCGGCGCTGATGGTGATTTCCACCAGCTTGCCCGGGTCGGCCGGCGCCGGCTCGGCGCTGGTGGCTTCGGG < 2:154801/149‑1GACTCGCGCTCTATGGCCTCGCTCAGGGTGGCCAGGTCGCTTTTGGGCAGCAGGTGGTTGTTCACCGAATACACGCCTTCGGCGCTGATGGTGATTTCCACCAGCTTGCCCGGGTCGGCCGGCGCCGGCTCGGCGCTGGTGGCTTCGGG < 1:262856/149‑1 TGGCCAGGTCGCTTTTGGGCAGCAGGTGGTTGTTCACCGAATACACGCCTTCGGCGCTGATGGTGATTTCCACCAGCTTGCCCGGGTCGGCCGGCGCCGGCTCGGCGCTGGTGGCTTC < 5:201771/118‑1 TGGCCAGGTCGCTTTTGGGCAGCAGGTGGTTGTTCACCGAATACACGCCTTCGGCGCTGATGGTGATTTCCACCAGCTTGCCCGGGTCGGCCGGCGCCGGCTCGGCGCTGGTGGCTTC > 6:201771/1‑118 TGATTTCCACCAGCTTGCCCGGGTCGGCCGGCGCCGGCTCGGCGCTGGTGGCTTCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGAGCGAG > 1:30960/1‑149 CACCAGCTTGCCCGGGTCGGCCGGCGCCGGCTCGGCGCTGGTGGCTTCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGAC < 5:5346/124‑1 CACCAGCTTGCCCGGGTCGGCCGGCGCCGGCTCGGCGCTGGTGGCTTCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGAC > 6:5346/1‑124 GGCCGGCGCCGGCTCGGCGCTGGTGGCTTCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGAGCGAGGCCATAGAGCGCGAGTCGGGCGGC < 2:30960/148‑1 GACTCGCGCTCTATGGCCTCGCTCAGGGTGGCCAGGTCGCTTTTGGGCAGCAGGTGGTTGTTCACCGAATACACGCCTTCGGCGCTGATGGTGATTTCCACCAGCTTGCCCGGGTCGGCCGGCGCCGGCTCGGCGCTGGTGGCTTCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2143507‑2143357‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcaAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGAGCGAGGCCATAGAGCGCGAGTCGGGCGGC > NC_002947/2143402‑2143514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |