New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2301454	0 (0.000)	72 (1.320)	55/252	NT	100%	intergenic (‑98/‑233)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	5545321 =	NA (NA)					intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB

CGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2301308‑2301454 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTC  >  NC_002947/5545321‑5545468                                                                                                                                                                                                                                                                                                          CGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTC                                                                                                                                                    >  8:161237/1‑149     CAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATC                                                                                                                                                <  6:328482/149‑1     CAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTAT                                                                                                                                                 <  7:25888/148‑1     CAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTAT                                                                                                                                                 <  1:242955/148‑1        GCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAA                                                                                                                                             <  8:39546/149‑1            TGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAgc                                                                                                                                         >  7:67247/1‑147            TGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAA                                                                                                                                             <  8:67247/145‑1             GGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGC                                                                                                                                                       >  6:301423/1‑134             GGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGC                                                                                                                                                       <  5:301423/134‑1               CCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGA                                                                                                                                      <  6:195900/149‑1                CCAGGTGCCAGTCGGAGGTATGAATCAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGA                                                                                                                                      >  7:52290/1‑148                       CCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGTGGAAAGTGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGTCAAGCCAGCTTCTATCAAACAAAAGATAACCCA                                                                                                                               <  6:4031/148‑1                       CCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCAC                                                                                                                              >  3:120564/1‑149                         AGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTC                                                                                                                                                    <  6:207034/125‑1                         AGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTC                                                                                                                                                    >  5:207034/1‑125                               AGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTT                                                                                                                      <  7:161237/149‑1                                 GTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCTAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCT                                                                                                                    <  2:342662/149‑1                                  TATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGAATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGAACGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAAAACACTGTTCTTTCTA                                                                                                                   >  3:121648/1‑149                                   ATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAA                                                                                                                                   >  2:333877/1‑132                                   ATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAA                                                                                                                                   <  1:333877/132‑1                                      AAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTT                                                                                                                      >  3:315880/1‑142                                      AAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTT                                                                                                                      <  4:315880/142‑1                                           GACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAA                                                                                                           >  4:296843/1‑148                                            ACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAA                                                                                                         >  5:82970/1‑149                                              GCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAA                                                                                                         >  6:334688/1‑147                                                   GATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGC                                                                                                  <  3:161038/149‑1                                                    ATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCG                                                                                                 >  4:148191/1‑149                                                    ATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCT                                                                                                                                                   >  2:312779/1‑99                                                    ATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCT                                                                                                                                                   <  1:312779/99‑1                                                         CTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGG                                                                                            >  7:41937/1‑149                                                          TGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGTGT                                                                                           >  8:252098/1‑149                                                            TTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTC                                                                                          >  5:48609/1‑148                                                                  TCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCCAGCCAGCGTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTGAATGGCG                                                                                   >  5:58184/1‑149                                                                  TCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCG                                                                                   >  1:150650/1‑149                                                                  TCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCG                                                                                   >  2:289228/1‑149                                                                    GAGTCGGGCAAGGGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGC                                                                                 <  3:264720/149‑1                                                                       TCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAA                                                                              <  2:150650/149‑1                                                                       TCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCCTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCATTCTAGCGATAAAAACAGGCCCGCGGGGACTATCGCGGCG                                                                                >  7:109996/1‑147                                                                        CGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAA                                                                              <  7:213501/148‑1                                                                           GCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                                          >  8:161081/1‑149                                                                            CAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTT                                                                         <  3:148191/149‑1                                                                             AAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTT                                                                         >  2:330464/1‑148                                                                             AAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTT                                                                         >  5:162895/1‑148                                                                                   GGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTT                                                                         <  6:94439/142‑1                                                                                   GGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTT                                                                         >  5:94439/1‑142                                                                                   GGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAAC                                                                                                                                  >  7:268399/1‑85                                                                                   GGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAAC                                                                                                                                  <  8:268399/85‑1                                                                                                TGGTAACCCAAGCGTGGGGCCAGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTAT                                                                                                                                                 <  1:59483/58‑1                                                                                                TGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCAATCTTCTATACGTGGTCA                                                     >  2:38746/1‑149                                                                                                TGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTAT                                                                                                                                                 >  2:59483/1‑57                                                                                                 GGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAA                                                                                        <  1:356040/113‑1                                                                                                   TAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAG                                                  >  4:123343/1‑149                                                                                                     ACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGC                                                 <  7:252098/148‑1                                                                                                     ACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                                          >  1:242966/1‑123                                                                                                     ACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                                          <  2:242966/123‑1                                                                                                      CCCATGCGTGGGGCC‑GCTGTGCGGCCCGATCGCTGGCTAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCTCGGGGTCAATGGCGTCGAAGTGTTCACTCTTGTATACGTGGTCACAGCAA                                               <  4:121648/149‑1                                                                                                      CCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAA                                               <  7:161081/149‑1                                                                                                       CCAAGCGTGGGGCC‑GCTGTGCGGCCCCATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAG                                              >  6:35552/1‑149                                                                                                         AAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCT                                            >  3:244224/1‑149                                                                                                         AAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTT                                                                         >  5:365006/1‑120                                                                                                         AAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTT                                                                         <  6:365006/120‑1                                                                                                         AAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATC                                                                                                                                                <  7:149188/49‑1                                                                                                         AAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATC                                                                                                                                                >  8:149188/1‑49                                                                                                          AGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTG                                           <  6:82970/149‑1                                                                                                            gatcGGGCC‑GCACAGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTG                                         >  7:236533/5‑149                                                                                                            CGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTG                                         <  3:123343/149‑1                                                                                                             GTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGC                                        <  3:296843/149‑1                                                                                                             GTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGC                                        <  5:35552/149‑1                                                                                                                  GCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGA                                     >  8:19999/1‑147                                                                                                                       CTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGA                               <  8:52290/149‑1                                                                                                                             GGCCCGATCGCGGGCAAACCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACG                         >  7:50061/1‑149                                                                                                                              GCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGC                        >  7:198431/1‑149                                                                                                                              GCCCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGC                        <  4:120564/149‑1                                                                                                                              GCCCGATCGCGGGCAAACCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGC                        <  8:50061/149‑1                                                                                                                                CCGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTGACTCTTCTTTTCGTGGTCACAGCAAGCTGTGCCGACAGGGAGTAACGCgg                      >  2:215478/1‑147                                                                                                                                 CGATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGA                     >  2:284011/1‑149                                                                                                                                  GATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGAT                    <  6:48609/149‑1                                                                                                                                  GATCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGAT                    >  2:128176/1‑149                                                                                                                                    TCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGC                  >  2:208290/1‑149                                                                                                                                    TCGCGGGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACATGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGC                  >  3:239199/1‑149                                                                                                                                         GGCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACATGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTT             <  4:239199/149‑1                                                                                                                                          GCAAGCCAGCTTCTATCAAACAAAAGATAACCCACTGATCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTG            >  8:79906/1‑149                                                                                                                                            AAGCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGG          <  4:244224/149‑1                                                                                                                                              GCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCC        >  2:31508/1‑149                                                                                                                                              GCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAG                                  <  1:163381/123‑1                                                                                                                                              GCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAG                                  >  2:163381/1‑123                                                                                                                                              GCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTG                                                                           <  1:276308/82‑1                                                                                                                                              GCCAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTG                                                                           >  2:276308/1‑82                                                                                                                                                CAGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCAC      <  8:198431/149‑1                                                                                                                                                 AGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGAT                    <  3:69602/134‑1                                                                                                                                                 AGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGAT                    >  4:69602/1‑134                                                                                                                                                  aCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTC    >  4:256005/2‑149                                                                                                                                                  GCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTC    >  3:190221/1‑149                                                                                                                                                  GCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACT     >  2:319188/1‑148                                                                                                                                                  GCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATAC                                                            <  7:50933/93‑1                                                                                                                                                  GCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATAC                                                            >  8:50933/1‑93                                                                                                                                                   CTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCT   <  5:160200/149‑1                                                                                                                                                    TTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCAGTCTTCTATATGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCGATTTGGGCCACTCTC  >  6:53525/1‑149                                                                                                                                                    TTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTC  >  8:153696/1‑149                                                                                                                                                                                                                                                                                                          CGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCC‑GCTGTGCGGCCCGATCGCGGGCAAGCCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2301308‑2301454 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTC  >  NC_002947/5545321‑5545468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.