| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2334268 = | 106 (1.910) | 7 (0.130) | 6/242 | NT | 6.2% | intergenic (+15/+65) | fadA/PP_2052 | 3‑ketoacyl‑CoA thiolase/bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase |
| ? | NC_002947 | 2334333 = | 111 (2.120) | coding (2124/2124 nt) | PP_2052 | bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase | |||||
AAGGACGCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2334422‑2334268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctggTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAACCCGGGGAAAGGTTTGTTGGCATGGGTGAGCACGGCTTCGACGCTT > NC_002947/2334333‑2334480 AAGGACGCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATG < 4:181813/149‑1 AGGACGCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGG > 2:176719/1‑149 AGGACGCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGG > 6:181800/1‑149 CGCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTG < 7:240113/149‑1 CGCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTG < 5:181800/149‑1 TGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCT < 6:240348/124‑1 TGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCT > 5:240348/1‑124 TGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGG > 4:73229/1‑121 TGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGG < 3:73229/121‑1 CGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCTCCATGGGCTG < 1:86821/86‑1 CGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTG > 2:86821/1‑86 TCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCGGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAG > 4:220588/1‑149 AACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCC > 6:273093/1‑149 AACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCC > 8:155010/1‑149 GGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCAC < 4:183037/119‑1 GGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCAC > 3:183037/1‑119 CGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCG‑‑‑‑‑‑GCCA‑GGGCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAA > 2:21892/1‑149 CCTGCGTCCCGGTCAGCGCCATGGGCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAACCCGGGGAAAGGTTTGTT < 5:273093/149‑1 GGGCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAACCCGGGGAAAGGTTTGTTGGCATGGGTGAGCACGGCTTC > 3:255318/1‑148 GTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAACCCGGGGAAAGGTTTGTTGGCATGGGTGAGCACGGCTTCGACGCTT < 4:255318/149‑1 GTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAACCCGGGGAAAGGTTTGTTGGCATGGGTGAGCACGGCTTCGACGCTT < 7:52687/149‑1 GTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAACCCGGGGAAAGGTTTGTTGGCATGGGTGAGCACGGCTTCGACGCTT > 7:66586/1‑149 AAGGACGCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2334422‑2334268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctggTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAACCCGGGGAAAGGTTTGTTGGCATGGGTGAGCACGGCTTCGACGCTT > NC_002947/2334333‑2334480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |