New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2570235	48 (0.870)	4 (0.080)	4/238	NT	7.6%	coding (133/669 nt)	PP_2253	GntR family transcriptional regulator
	?	NC_002947	= 2570259	52 (1.010)					coding (109/669 nt)	PP_2253	GntR family transcriptional regulator

GCCGGGCACTGAGCACCTGACGTGCCTGGTCCGGGTCAGGCGCAGCCAGATGCGCGGTGTGGCTGGGGCGCTGTACCACCACCTGCTGGTCGGACAGGCGCCCGAGCACACGGCGGATCACCGTGCGGCTGACACCAAAGGCATGGCCCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2570079‑2570235 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcctgCCACCGGGCAGTCTGTTGCCCGAACAGGCGCTGGGCCATGCCTTTGGTGTCAGCCGCACGGTGATCCGCCGTGTGCTCGGGCGCCTGTCCGACCAGCAGGTGGTGGTACAGCGCCCCAGCCACACCGCGCATCTGGCTGCGC  <  NC_002947/2570259‑2570118                                                                                                                                                                                                                                                                                                             GCCGGGCACTGAGCACCTGACGTCCCTGGTCCGGGTCAGGCGCAGCCAGATGCGCGGTGTGGCTGGGGCGCTGTACCACCACCTGCTGGTCGGACAGGCGCCCGAGCACACGGCGGATCACCGTGCGGCTGACACCAAAGGCATGGCCC                                                                                                                                                        <  3:206242/149‑1                         CCTGGTCCGGGTCAGGCGCAGCCAGATGCGCGGTGTGGCTGGGGCGCTGTACCACCACCTGCTGGTCGGACAGGCGCCCGAGCACACGGCGGATCACCGTGCGGCTGACACCAAAGGCATGGCCCAGCGCCTGCCACCGGGCAGTCTGT                                                                                                                                >  7:15983/1‑149                                           CAGCCAGATGCGCGGTGTGGCTGGGGCGCTGTACCACCACCTGCTGGTCGGACAGGCGCCCGAGCACACGGCGGATCACCGTGCGGCTGACACCAAAGGCATGGCCCAGCGCCTGCCACCGGGCAGTCTGTTGCCCGAACAGGCGCTGG                                                                                                              <  8:15983/149‑1                                                                                                                                    ACACCAAAGGCATGGCCCAGCGCCTGCCACCGGGCAGTCTGTTGCCCGAACAGGCGCTGGGCCATGCCTTTG                                                                                                  >  5:114093/1‑72                                                                                                                                    ACACCAAAGGCATGGCCCAGCGCCTGCCACCGGGCAGTCTGTTGCCCGAACAGGCGCTGGGCCATGCCTTTG                                                                                                  <  6:114093/72‑1                                                                                                                                                     CAGCGCCTGCCACCGGGCAGTCTGTTGCCCGAACAGGCGCTGGGCCATGCCTTTGGTGTCAGCCGCACGGTGATCCGCCGTGTGCTCGGGCGCCTGTCCGACCAGCAGGTGGTGGTACAGCGCCCCAGCCACACCGCGCATCTGGCTGC    <  3:262192/149‑1                                                                                                                                                     CAGCGCCTGCCACCGGGCAGTCTGTTGCCCGAACAGGCGCTGGGCCATGCCTTTGGTGTCAGCCGCACGGTGATCCGCCGTGTGCTCGGGCGCCTGTCCGACCAGCAGGTGGTGGTACAGCGCCCCAGCCACACCGCGCATCTGGCTGC    <  7:325295/149‑1                                                                                                                                                       GCGCCTGCCACCGGGCAGTCTGTTGCCCGAACAGGCGCTGGGCCATGCCTTTGGTGTCAGCCGCACGGTGATCCGCCGTGTGCTCGGGCGCCTGTCCGACCAGCAGGTGGTGGTACAGCGCCCCAGCCACACCGCGCATCTGGCTGCGC  <  3:8860/149‑1                                                                                                                                                                                                                                                                                                             GCCGGGCACTGAGCACCTGACGTGCCTGGTCCGGGTCAGGCGCAGCCAGATGCGCGGTGTGGCTGGGGCGCTGTACCACCACCTGCTGGTCGGACAGGCGCCCGAGCACACGGCGGATCACCGTGCGGCTGACACCAAAGGCATGGCCCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2570079‑2570235 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcctgCCACCGGGCAGTCTGTTGCCCGAACAGGCGCTGGGCCATGCCTTTGGTGTCAGCCGCACGGTGATCCGCCGTGTGCTCGGGCGCCTGTCCGACCAGCAGGTGGTGGTACAGCGCCCCAGCCACACCGCGCATCTGGCTGCGC  <  NC_002947/2570259‑2570118

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.