| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2590842 = | 68 (1.230) | 4 (0.080) | 4/242 | NT | 6.4% | coding (186/426 nt) | PP_2268 | endodeoxyribonuclease I |
| ? | NC_002947 | 2590879 = | 53 (1.010) | coding (223/426 nt) | PP_2268 | endodeoxyribonuclease I | |||||
GGCATACTGGAAGCCGTTCTTGCTGCACCAATCCGCGTAGGTGGTGGTACTGCGTTTATTTATTTTTGTTTTTGAGTTGGAGAAGACAAAGCGCACGTCAAGTTCAGGGTGCTGCGCTTTGACCAGGAGTTGCTTTTGGCGGTCCTCGGTCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2590995‑2590842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaaaGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCATGCCTGGCTTAAC > NC_002947/2590879‑2591025 GGCATACTGGAAGCCGTTCTTGCTGCACCAATCCGCGTAGGTGGTGGTACTGCGTTTATTTATTTTTGTTTTTGAGTTGGAGAAGACAAAGCGCACGTCAAGTTAAGGGTGCTGCGCTTTGACAAGGATTTGCTTTTGGCGGTCATCGG > 7:225072/1‑149 CATACTGGAAGCCGTTCTTGCTGCACCAATCCGCGTAGGTGGTGGTACTGCGTTTATTTATTTTTGTTTTTGAGTTGGAGAAGACAAAGCGCACGTCAAGTTCAGGGTGCTGCGCTTTGACCAGGAGTTGCTTTTGGCGGTCCTCGGT > 8:94550/1‑148 ATACTGGAAGCCGTTCTTGCTGCACCAATCCGCGTAGGTGGTGGTACTGCGTTTATTTATTTTTGTTTTTGAGTTGGAGAAGACAAAGCGCACGTCAAGTTCAGGGTGCTGCGCTTTGACCAGGAGTTGCTTTTGGCGGTCCTCGGTCA < 7:94550/149‑1 CTTTGACCAGGAGTTGCTTTTGGCGGTCCTCGGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAAC < 3:352462/140‑1 CTTTGACCAGGAGTTGCTTTTGGCGGTCCTCGGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAAC > 4:352462/1‑140 TTTGACCAGGAGTTGCTTTTGGCGGTCCTCGGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAG > 5:238926/1‑148 GCGGTCCTCGGTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCC < 6:238926/149‑1 GTCAAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCATGCCTGGCT > 2:216095/1‑149 AAAGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCATGCCTGGCTTAA > 1:235247/1‑149 AGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAGACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCATGCCTGGCTTAAC > 2:352298/1‑148 AGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCATGCCTGGCTTAAC > 5:218329/1‑148 GGCATACTGGAAGCCGTTCTTGCTGCACCAATCCGCGTAGGTGGTGGTACTGCGTTTATTTATTTTTGTTTTTGAGTTGGAGAAGACAAAGCGCACGTCAAGTTCAGGGTGCTGCGCTTTGACCAGGAGTTGCTTTTGGCGGTCCTCGGTCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2590995‑2590842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaaaGCGCAGCACCCTGAACTTGACGTGCGCTTTGTCTTCTCCAACTCAAAAACAAAAATAAATAAACGCAGTACCACCACCTACGCGGATTGGTGCAGCAAGAACGGCTTCCAGTATGCCGACAAGTTGGTTCCCCATGCCTGGCTTAAC > NC_002947/2590879‑2591025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |