New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2671963 = | 54 (0.980) | 6 (0.110) | 6/248 | NT | 10.0% | coding (355/2610 nt) | acnB | aconitate hydratase B |
? | NC_002947 | 2672016 = | 56 (1.040) | coding (302/2610 nt) | acnB | aconitate hydratase B |
CGCCGTCGCCAAGGGCGAAGCCAAGTCGCCACTGATCGACCGCAAGCACGCCACCGAACTGCTGGGCACCATGCAGGGCGGCTACAACATCGAAACGCTGGTCGCACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2672111‑2671963 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTG‑GCGACTTGGCTTCGCCCTTGGCGACGGCGGAGAGGAAAGCGGCCTTGACGTAGGCAGCTTCGTCGACCCCTGGCGGTAC > NC_002947/2672016‑2672161 CGCCGTCGCCAAGGGCGAAGCCAAGTCGCCACTGATCGACCGCAAGCACGCCACCGAACTGCTGGGCACCATGCAGGGCGGCTACAACATCGAAACGCTGGTCGCACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACA < 1:34000/147‑1 CGAAACGCTGGTCGCACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGCGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTG‑GCGACTTGGCTTCGCCCTTGG > 1:155389/1‑147 CGAAACGCTGGTCGCACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGCGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTG‑GCGACTTGGCTTCGCCCTTGG < 2:155389/147‑1 CGCTGGTCGCACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGCGTTTCGATGTTGTAGCCGCCCTGCATGGTGCACAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTG‑GCGACTTGGCTTCGCCCTTGGCGACGGC > 2:65381/1‑149 GCTGGTCGCACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGCGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTAGCGGTCGATCAGTG‑GCGACTTGGCTTCGCCCTTGGCGACGGCG > 2:75661/1‑149 ACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGCGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTGCGCGACTTGGCTTCGCCCTTGGCGACGGCGGAGAGGAA < 1:65381/149‑1 ACGCCGAACTGGGCGCCATCGCGGCCGAACAGCGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTAGCGGTCGATCAGTG‑GCGACTTGGCTTCGCCCTTGGCGACGGCGGAGAGGAAAGCGGCCTTGAC < 1:75661/149‑1 AGCGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGGTTGCGGTCGATCAGTG‑GCGACTTGGCTTCGCCCTTGGCGACGGCGGAGAGGAAAGCGGCCTTGACGTAGGCAGCTTCGTCGCCCCCTGGCGGTAC > 7:318885/1‑149 CGCCGTCGCCAAGGGCGAAGCCAAGTCGCCACTGATCGACCGCAAGCACGCCACCGAACTGCTGGGCACCATGCAGGGCGGCTACAACATCGAAACGCTGGTCGCACTGCTGGATGACGCCGAACTGGGCGCCATCGCGGCCGAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2672111‑2671963 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcGTTTCGATGTTGTAGCCGCCCTGCATGGTGCCCAGCAGTTCGGTGGCGTGCTTGCGGTCGATCAGTG‑GCGACTTGGCTTCGCCCTTGGCGACGGCGGAGAGGAAAGCGGCCTTGACGTAGGCAGCTTCGTCGACCCCTGGCGGTAC > NC_002947/2672016‑2672161 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |