New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2684782 =	70 (1.260)	4 (0.080)	4/234	NT	6.3%	coding (101/243 nt)	PP_5520	hypothetical protein
	?	NC_002947	2684834 =	55 (1.090)					coding (49/243 nt)	PP_5520	hypothetical protein

CAATCGCATTCCGCACTTCCAATCAGGTAAGCCCATTGCATTGACCAAGGAGGACCCCATGCCTGTCTCTCACGACCTCTACCAGGACCTGCACTACCCGCGCGAAATCGTCCAGCAGCGCCGCCAGCAGGACAAGGCGCTGGATCGCCTGCTGGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2684940‑2684782 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctggacgaTTTCGCGCGGGTAGTGCAGGTCCTGGTAGAGGTCGTGAGAGACAGGCATGGGGTCCTCCTTGGTCAATGCAATGGGCTTACCTGATTGGAAGTGCGGAATGCGATTGTGTTGAAGCGAGGCGGGCGGAAACCGACGGACGGTCGCTG  >  NC_002947/2684834‑2684980                                                                                                                                                                                                                                                                                                                    CAATCGCATTCCGCACTTCCAATCAGGTAAGCCCATTGCATTGACCAAGGAGGACCCCATGCCTGTCTCTCACGACCTCTACCAGGACCTGCACTACCCGCGCGAAATCGTCCAGCAGCGCCGCCAGCAGGACAAGGCGCTGGATCGCC                                                                                                                                                               <  8:110778/149‑1  AATCGCATTCCGCACTTCCAATCAGGTAAGCCCATTGCATTGACCAAGGAGGACCCCATGCCTGTCTCTCACGACCTCTACCAGGACCTGCACTACCCGCGCGAAATCGTCCAGCAGCGCCGCCAGCAGGACAAGGCGCTGGATGGCCT                                                                                                                                                              >  5:362712/1‑149    TCGCATTCCGCACTTCCAATCAGGTAAGCCCATTGCATTGACCAAGGAGGACCCCATGCCTGTCTCTCACGACCTCTACCAGGACCTGCACTACCCGCGCGAAATCGTCCAGCAGCGCCGCCAGCAGGACAAGGCGCTGGATCGCCTGC                                                                                                                                                            <  2:320543/149‑1                                                                                 ACCAGGACCTGCACTACCCGCGCGAAATCGTCCAGCAGCGCCGCCAGCAGGACAAGGCGCTGGATCGCCTGCTGGAC                                                                                                                                                       <  7:328254/77‑1                                                                                 ACCAGGACCTGCACTACCCGCGCGAAATCGTCCAGCAGCGCCGCCAGCAGGACAAGGCGCTGGATCGCCTGCTGGAC                                                                                                                                                       >  8:328254/1‑77                                                                                                               TCCAGCAGCGCCGCCAGCAGGACAAGGCGCTGGATCGCCTGCTGGACGATTTCGCGCGGGTAGTGCAGGTCCTGGTAGAGGTCGTGAGAGACAGGCATGGGGTCCTCCTTGGTCAATGCAATGGGCTTACCTGATTGGAAGTGCGGAAT                                                 >  6:280393/1‑149                                                                                                                    CAGCGCCGCCAGCAGGACAAGGCGCTGGATCGCCTGCTGGACGATTTCGCGCGGGTAGTGCAGGTCCTGGTAGA                                                                                                                       >  1:270809/1‑74                                                                                                                    CAGCGCCGCCAGCAGGACAAGGCGCTGGATCGCCTGCTGGACGATTTCGCGCGGGTAGTGCAGGTCCTGGTAGA                                                                                                                       <  2:270809/74‑1                                                                                                                        GCCGCCAGCAGGACAAGGCGCTGGATCGCCTGCTGGACGATTTCGCGCGGGTAGTGCAGGTCCTGGTAGAGGTCGTGAGAGACAGGCATGGGGTCCTCCTTGGTCAATGCAATGGGCTTACCTGATTGGAAGTGCGGAATGCGATTGTG                                        <  5:280393/149‑1                                                                                                                                                  gcggTGCTGTACGATTTCGCGCGGGTAGTGCAGGTCATGGTAGAGGTCGTGAGAGACAGGCATGGGGTCCTCCTTGGTCAATGCAATGGGCTTACCTGATTGGAAGTGCGGAATGCGATTGTGTTGAAGCGAGGCGGGCGGAAACCGAC              <  8:243584/145‑1                                                                                                                                                      TGCTGGACGATTTCGCGCGGGTAGTGCAGGTCCTGGTAGAGGTCGTGAGAGACAGGCATGGGGTCCTCCTTGGTCAATGCAATGGGCTTACCTGATTGGAAGTGCGGAATGCGATTGTGTTGAAGCGAGGCGGGCGGAAACCGACGGAC          >  3:327979/1‑149                                                                                                                                                        CTGGACGATTTCGCGCGGGTAGTGCAGGTCCTGGTAGAGGTCGTGAGAGACAGGCATGGGGTCCTCCTTGGTCAATGCAATGGGCTTACCTGATTGGAAGTGCGGAATGCGATTGTGTTGAAGCGAGGCGGGCGGAAACCGACGGACGG        >  5:301105/1‑149                                                                                                                                                           GACGATTTCGCGCGGGTAGTGCAGGTCCTGGTAGAGGTCGTGAGAGACAGGCATGGGGTCCTCCTTGGTCAATGCAATGGGCTTACCTGATTGGAAGTGCGGAATGCGATTGTGTTGAAGCGAGGCGGGCGGAAACCGACGGACGGTCG     >  8:44799/1‑149                                                                                                                                                           GACGATTTCGCGCGGGTAGTGCAGGTCCTGGTAGAGGTCGTGAGAGACAGGCATGGGGTCCTCCTTGGTCAATGCAATGGGCTTACCTGATTGGAAGTGCGGAATGCGATTGTGTTGAAGCGAGGCGGGCGGAAACCGACGGACGG        >  3:137480/1‑146                                                                                                                                                           GACGATTTCGCGCGGGTAGTGCAGGTCCTGGTAGAGGTCGTGAGAGACAGGCATGGGGTCCTCCTTGGTCAATGCAATGGGCTTACCTGATTGGAAGTGCGGAATGCGATTGTGTTGAAGCGAGGCGGGCGGAAACCGACGGACGG        <  4:137480/146‑1                                                                                                                                                              GATTTCGCGCGGGTAGTGCAGGTCCTGGTAGAGGTCGTGAGAGACAGTCATGGGGTCCTCCTTGGTCAATGCAATGGGCTTACCTGATTGGAAGTGCGGAATGCGATTGTGTTGAAGCGAGGCGGGCGGAAACCGACGGACGGTCGCTG  <  4:111375/149‑1                                                                                                                                                                                                                                                                                                                    CAATCGCATTCCGCACTTCCAATCAGGTAAGCCCATTGCATTGACCAAGGAGGACCCCATGCCTGTCTCTCACGACCTCTACCAGGACCTGCACTACCCGCGCGAAATCGTCCAGCAGCGCCGCCAGCAGGACAAGGCGCTGGATCGCCTGCTGGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2684940‑2684782 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctggacgaTTTCGCGCGGGTAGTGCAGGTCCTGGTAGAGGTCGTGAGAGACAGGCATGGGGTCCTCCTTGGTCAATGCAATGGGCTTACCTGATTGGAAGTGCGGAATGCGATTGTGTTGAAGCGAGGCGGGCGGAAACCGACGGACGGTCGCTG  >  NC_002947/2684834‑2684980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.