| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2785510 | 73 (1.320) | 4 (0.080) | 4/238 | NT | 5.4% | coding (304/390 nt) | PP_5523 | hypothetical protein |
| ? | NC_002947 | = 2785556 | 73 (1.420) | coding (350/390 nt) | PP_5523 | hypothetical protein | |||||
CCTATCTTGAGCAGATGAAACCCGTATGGGGCGGACGAAACCTAAGGCATCGATGCCTACTGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2785355‑2785510‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccaaagtGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGGGGGAAATTGTCAAGCTCCGCTTCGTTCAACCAACCGAGGCGTAAATGTAACCTTGGGAATGTGACCAAAGCGCTTACTGTACTCATCAGTAG < NC_002947/2785556‑2785411 CCTATCTTGAGCAGATAAAACCCGTATGGGGCGGACGAAACCTAAGGCATCGATGCCTACTGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCC > 6:112765/1‑149 CTATCTTGAGCAGATGAAACCCGTATGGGGCGGACGAAACCTAAGGCATCGATGCCTACTGATGAGTACAGTAAGCGCTTTGGTCAGATTCCCAAGGTTACATTTACGCCTGGGTTGGGTGATCGAAGAGGTGCTGGACATTTTCGCCC > 8:186827/1‑149 ACCCGTATGGGGCGGACGAAACCTAAGGCATCGATGCCTACTGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGTGAGGCAATC > 3:177018/1‑146 TACTGATGAGTACACTAAGCGCTTTGGTCACATACCCAAGGTTACATTTACTCCTCGTTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGTGAGCCAATCAAGATCAGCCAAAGGGCTGCTCCAATATATCGCGTCAAGTT > 2:151696/1‑149 TGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGG < 4:177018/149‑1 tTGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGTAGCGGAGCTTTACAATTTCCCCCCAAAGTGAGGAAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGG < 1:151696/147‑1 AGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCC < 1:201627/81‑1 AGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCC > 2:201627/1‑81 CCAAAGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGGGGGAAATTGTCAAGCTCCGCTTCGTTCAACCAACCGAGGCGTAAATGTAACCTTGGGAATGTGACCAAAGCGCTTACTGTACTCATCA > 7:171913/1‑149 AAAGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGGGGGAAATTGTCAAGCTCCGCTTCGTTCAACCAACCGAGGCGTAAATGTAACCTTGGGAATGTGACCAAAGCGCTTACTGTACTCATCAGT < 4:240037/149‑1 AGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGGGGGAAATTGTCAAGCTCCGCTTCGTTCAACCAACCGAGGCGTAAATGTAACCTTGGGAATGTGACCAAAGCGCTTACTGTACTCATCAGTAG > 1:246751/1‑149 AGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGGGGGAAATTGTCAAGCTCCGCTTCGTTCAACCAACCGAGGCGTAAATGTAACCTTGGGAATGTGACCAAAGCGCTTACTGTACTCATCAGTAG < 2:246751/149‑1 CCTATCTTGAGCAGATGAAACCCGTATGGGGCGGACGAAACCTAAGGCATCGATGCCTACTGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2785355‑2785510‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccaaagtGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGGGGGAAATTGTCAAGCTCCGCTTCGTTCAACCAACCGAGGCGTAAATGTAACCTTGGGAATGTGACCAAAGCGCTTACTGTACTCATCAGTAG < NC_002947/2785556‑2785411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |