New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3013550 = | 56 (1.010) | 4 (0.080) | 4/246 | NT | 6.4% | coding (82/2610 nt) | bcsA | cellulose synthase and translocator subunit |
? | NC_002947 | 3013626 = | 64 (1.200) | coding (158/2610 nt) | bcsA | cellulose synthase and translocator subunit |
CAACAACCACAGGCTCTGGATCAACAGACGCAGCGGGTCACCCAGGGTCGGGCGCTTGCCCGCCAGCTGCGGGTACAGGCGTTGGCGCTCGGCCAGCAGCGCCTGCCAGGCGGGTGATTCCAGGCGCAGGAACAGGAAGGCCAGCCACACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3013702‑3013550 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgccTGTACCCGCAGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCG > NC_002947/3013626‑3013717 CAACAACCACAGGCTCTGGATCAACAGACGCAGCGGGTCACCCAGGGTCGGGCGCTTGCCCGCCAGCTGCGGGTACAGGCGTTGGCGCTCGGCCAGCAGCGCCTGCCAGGCGGGTGATTCCAGGCGCAGGAACAGGAAGGCCAGCCACA > 3:33113/1‑149 CAACCACAGGCTCTGGATCAACAGACGCAGCGTGTCACCCAGGGTCGGGCGCTTGCCCTCCAGCTGCGGGTACAGGCGTTGGCGCTCGGCCAGCAGCGCCTGCCAGGCGGGTGATTCCAGGCGCAGGAACAGGAAGGCCAGCCACACGC < 5:68328/149‑1 CCACAGGCTCTGGATCAACAGACGCAGCGGGTCACCCAGGGTCGGGCGCTTGCCCGCCAGCTGCGGGTACAGGCGTTGGCGCTCGGCCAGCAGCGCCTGCCAGGCGGGTGATTCCAGGCGCAGGAACAGGAAGGCCAGCCACACGCC > 6:193704/1‑147 GGTACAGGCGTTGGCGCTCGGCCAGCAGCGCCTGCCAGGCGGGTGTTTCCAGGCGCAGGAACAGGAAGGCCAGCCACACGCCTGTACCCGCGGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCT > 1:253779/1‑149 AGGCGTTGGCGCTCGGCCAGCAGCGCCTGCCAGGCGGGTGATTCCAGGCGCAGGAACAGGAAGGCCAGCCACACGCCTGTACCCGCAGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGT < 5:286747/131‑1 AGGCGTTGGCGCTCGGCCAGCAGCGCCTGCCAGGCGGGTGATTCCAGGCGCAGGAACAGGAAGGCCAGCCACACGCCTGTACCCGCAGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGT > 6:286747/1‑131 CAGCGCCTGCCAGGCGGGTGATTCCAGGCGCAGGAACAGGAAGGCCAGCCACACGCCTGTACCCGCGGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCG < 2:253779/149‑1 CAACAACCACAGGCTCTGGATCAACAGACGCAGCGGGTCACCCAGGGTCGGGCGCTTGCCCGCCAGCTGCGGGTACAGGCGTTGGCGCTCGGCCAGCAGCGCCTGCCAGGCGGGTGATTCCAGGCGCAGGAACAGGAAGGCCAGCCACACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3013702‑3013550 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgccTGTACCCGCAGCTGGCGGGCAAGCGCCCGACCCTGGGTGACCCGCTGCGTCTGTTGATCCAGAGCCTGTGGTTGTTGCTGCGGCGCCAACCG > NC_002947/3013626‑3013717 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |