| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3015001 | 53 (0.960) | 3 (0.060) | 3/240 | NT | 5.5% | coding (1533/2610 nt) | bcsA | cellulose synthase and translocator subunit |
| ? | NC_002947 | = 3015025 | 54 (1.040) | coding (1557/2610 nt) | bcsA | cellulose synthase and translocator subunit | |||||
CGCCCTGCGCCTGCATCGTCAAGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3014848‑3015001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgctgGAACAGGCTAAGGCCACGCCCGAACAGCGGGT < NC_002947/3015025‑3014994 CGCCCTGCGCCTGCATCGTCAAGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACC > 1:337304/1‑149CGCCCTGCGCCTGCATCGTCAAGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACC > 3:62112/1‑149 CCCTGCGCCTGCATCGTCAAGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCG > 4:108525/1‑149 CTGCGCCTGCATCGTCAAGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCT < 3:144062/149‑1 TGCGCCTGCATCGTCAAGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTG > 1:283629/1‑149 CTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGGAACAGGCTAAGGCCACGCCCGAACAGCGGG < 2:337304/149‑1 GAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAAC < 3:45112/106‑1 GAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAAC > 4:45112/1‑106 TTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGGAACAGGCTAAGGCCACGCCCGAACAGCGGGT > 5:188951/1‑139 TTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTGGAACAGGCTAAGGCCACGCCCGAACAGCGGGT < 6:188951/139‑1 CGCCCTGCGCCTGCATCGTCAAGGGTGGACATCAGCCTACCTGAGCATTCCGCAGGCTGCGGGCCTGGCCACTGAAAGCCTGTCGGCGCACATCGGCCAGCGCATTCGCTGGGCCCGTGGGATGGTGCAGATCTTCCGCACCGACAACCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3014848‑3015001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgctgGAACAGGCTAAGGCCACGCCCGAACAGCGGGT < NC_002947/3015025‑3014994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |