New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3073066	64 (1.160)	4 (0.080)	4/246	NT	6.1%	coding (772/1671 nt)	PP_2683	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3073109	61 (1.150)					coding (815/1671 nt)	PP_2683	two‑component system sensor histidine kinase/response regulator

GCAACCGTTGAACGCTGCCCGCTTGCTGATTTCGACCTTGCGCGAGCGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3072918‑3073066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAGCCGGGAAATGTCCAGCAAGTCGGTCAGCAGGTCTTCCGCGCCCTCCAGGGCCTGGTGGGTACGCTCCACCAGCACATGCTCGGCCTCTGGCAATGGCCGC  <  NC_002947/3073109‑3072963                                                                                                                                                                                                                                                                                                          GCAACCGTTGAACGCTGCCCGCTTGCTGATTTCGACCTTGCGCGAGCGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTC                                                                                                                                                      >  2:41830/1‑148   AACCGTTGAACGCTGCCCGCTTGCTGATTTCGACCTTGCGCGAGCGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCGTC                                                                                                                                                   >  1:53333/1‑149                                        GCGCGAGCGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCGTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCC                                                                                                              >  8:239336/1‑149                                                 GCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCGTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAGC                                                                                                     <  7:239336/149‑1                                                  CCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCGTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAGCC                                                                                                    <  2:53333/149‑1                                                                                                                                         ATTTCCCGGCTCGTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAGCCGGGAAATGTCCAGCAAGTCGGTCAGCAGGTCTTCCGCGCCCTCCAGGGCCTGGTGGGTACGCTCCACCAGCACATGCTCGGCCTCTG             >  2:290943/1‑149                                                                                                                                                    CGTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAGCCGGGAAATGTCCAGCAAGTCGGTCAGCAGGTCTTCCGCGCCCTCCAGGGCCTGGTGGGTACGCTCCACCAGCACATGCTCGGCCTCTGGCAATGGCCGC  <  7:275378/149‑1                                                                                                                                                                                                                                                                                                          GCAACCGTTGAACGCTGCCCGCTTGCTGATTTCGACCTTGCGCGAGCGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3072918‑3073066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAGCCGGGAAATGTCCAGCAAGTCGGTCAGCAGGTCTTCCGCGCCCTCCAGGGCCTGGTGGGTACGCTCCACCAGCACATGCTCGGCCTCTGGCAATGGCCGC  <  NC_002947/3073109‑3072963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.