New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3114688	58 (1.050)	4 (0.080)	4/246	NT	6.2%	coding (273/537 nt)	PP_2730	lipoprotein
	?	NC_002947	= 3114719	66 (1.240)					coding (304/537 nt)	PP_2730	lipoprotein

GTTCAGGCGTGGGGGATGTTTCAGAAGCGTTCCGGTGAGGTGGTCAAGCGCTTCCATGTGCGCATCGACAGCCGCCGCGAGGGTGAACGGCTGATCCTCGACGAGCATTTTCTCTATAGCGATGGCACACGCCAGCAGCGTACCTGGACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3114536‑3114688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgTTCCCCGCCAGCGCCCGGGGCCGTCCGGCACCAGCGTCCAGGTACGCTGCTGGCGTGTGCCATCGCTATAGAGAAAATGCTCGTCGAGGATCAGCCGTTCACCCTCGCGGCGGCTGTCGATGCGCACATGGAAGCGCTTGACCAC  <  NC_002947/3114719‑3114575                                                                                                                                                                                                                                                                                                            GTTCAGGCGTGGGGGATGTTTCAGAAGCGTTCCGGTGAGGTGGTCAAGCGCTTCCATGTGCGCATCGACAGCCGCCGCGAGGGTGAACGGCTGATCCTCGACGAGCATTTTCTCTATAGCGATGGCACACGCCAGCAGCGTACCTGGAC                                                                                                                                                       >  8:165347/1‑149              GGATGTTTCAGAAGCGTTCCGGTGAGGTGGTCAAGCGCTTCCATGTGCGCATCGACAGCCGCCGCGAGGGTGAACGGCTGATCCTCGACGAGCATTTTCTCTATAGCGATGGCACACGCCAGCAGCGTACCTGGACGC                                                                                                                                                     >  5:11078/1‑138              GGATGTTTCAGAAGCGTTCCGGTGAGGTGGTCAAGCGCTTCCATGTGCGCATCGACAGCCGCCGCGAGGGTGAACGGCTGATCCTCGACGAGCATTTTCTCTATAGCGATGGCACACGCCAGCAGCGTACCTGGACGC                                                                                                                                                     <  6:11078/138‑1                                            TCAAGCGCTTCCATGTGCGCATCGACAGCCGCCGCGAGGGTGAACGGCTGATCCTCGACGAGCATTTTCTCTATAGCGATGGCACACGCCAGCAGCGTACCTGGACGCTGTTCCCCGCCAGCGCCCGGGGCCGTCCGGCACC                                                                                                                   >  5:300767/1‑142                                            TCAAGCGCTTCCATGTGCGCATCGACAGCCGCCGCGAGGGTGAACGGCTGATCCTCGACGAGCATTTTCTCTATAGCGATGGCACACGCCAGCAGCGTACCTGGACGCTGTTCCCCGCCAGCGCCCGGGGCCGTCCGGCACC                                                                                                                   <  6:300767/142‑1                                                                      AGCCGCCGCGAGGGTGAACGGCTGATCCTCGACGAGCATTTTCTCTATAGCGATGGCACACGCCAGCAGCGTACCTGGACGCTGTTCCCCGCCAGCGCCCGGGGCCGTCCGGCACCAGCGTCCAGG                                                                                                         >  5:220921/1‑126                                                                      AGCCGCCGCGAGGGTGAACGGCTGATCCTCGACGAGCATTTTCTCTATAGCGATGGCACACGCCAGCAGCGTACCTGGACGCTGTTCCCCGCCAGCGCCCGGGGCCGTCCGGCACCAGCGTCCAGG                                                                                                         <  6:220921/126‑1                                                                                                                                                      GCTGTTCCCCGCCAGCGCCCGGGGCCGTCCGGCACCAGCGTCCAGGTACGCTGCTGGCGTGTGCCATCGCTATAGAGAAAATGCTCGTCGAGGATCAGCCGTTCACCCTCGCGGCGGCTGTCGATGCGCACATGGAAGCGCTTGACCAC  >  5:1647/1‑149                                                                                                                                                                                                                                                                                                            GTTCAGGCGTGGGGGATGTTTCAGAAGCGTTCCGGTGAGGTGGTCAAGCGCTTCCATGTGCGCATCGACAGCCGCCGCGAGGGTGAACGGCTGATCCTCGACGAGCATTTTCTCTATAGCGATGGCACACGCCAGCAGCGTACCTGGACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3114536‑3114688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgTTCCCCGCCAGCGCCCGGGGCCGTCCGGCACCAGCGTCCAGGTACGCTGCTGGCGTGTGCCATCGCTATAGAGAAAATGCTCGTCGAGGATCAGCCGTTCACCCTCGCGGCGGCTGTCGATGCGCACATGGAAGCGCTTGACCAC  <  NC_002947/3114719‑3114575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.