| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3211375 = | 55 (0.990) | 4 (0.080) | 4/242 | NT | 7.0% | coding (412/1254 nt) | PP_2815 | hypothetical protein |
| ? | NC_002947 | 3211414 = | 54 (1.030) | coding (451/1254 nt) | PP_2815 | hypothetical protein | |||||
CTGCCATCGAGCAGCCGGCTGACCAGGCTGCGTTTATCGATAGGGTCGTCATGGGCCTGGGCGCTTTTTTCTTCGAGGATGATCTGCGTCACCACGCGCATGTTGCTGTCGATGAATTCCGAGATCGACCGCGACGAGACCTCCAGGAATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3211526‑3211375‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaattcATCGACAGCAACATGCGCGTGGTGACGCAGATCATCCTCGAAGAAAAAAGCGCCCAGGCCCATGACGACCCTATCGATAAACGCAGCCTGGTCAGCCGGCTGCTCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTG > NC_002947/3211414‑3211560 CTGCCATCGAGCAGCCGGCTGACCAGGCTGCGTTTATCGATAGGGTCGTCATGGGCCTGGGCGCTTTTTTCTTCGAGGATGATCTGCGTCACTACGCGCATGTTGCTGTCGATGAATTCCGAGATCGACCGCGACGAGACCTCCAGGAA > 2:286654/1‑149 TGCCATCGAGCAGCCGGCTGACCAGGCTGCGTTTATCGATAGGGTCGTCATGGGCCTGGGCGCTTTTTTCTTCGAGGATGATCTGCGTCACCACGCGCATGTTGCTGTCGATGAATTACGAGATCGACCGCGACGAGACCTCCAGGAAg > 2:296372/1‑148 CCATCGAGCAGCCGGCTGACCAGGCTGCGTTTATCGATAGGGTCGTCATGGGCCTGGGCGCTTTTTTCTTCGAGGATGATCTGCGTCACCACGCGCATGTTGCTGTCGATGAATTCCGAGATCGACCGCGACGAGACCTCCAGGAATTC < 5:91349/149‑1 CCGGCTGACCAGGCTGCGTTTATCGATAGGGTCGTCATGGGCCTGGGCGCTTTTTTCTTCGAGGATGATCTGCGTCACCATGCGCATGTTGCTGTCGATGAATTCCGAGATCGACCGCGACGAGACCTCCAGGAATT < 1:97952/137‑1 CCGGCTGACCAGGCTGCGTTTATCGATAGGGTCGTCATGGGCCTGGGCGCTTTTTTCTTCGAGGATGATCTGCGTCACCACGCGCATGTTGCTGTCGATGAATTCCGAGATCGACCGCGACGAGACCTCCAGGAATT > 2:97952/1‑137 GTCGATGAATTCCGAGATCGACCGCGACGAGACCTCCAGGAATTCATCGACAGCAACATGCGCGTGGTGACGCAGATCATCCTCGAAGAAAAAAGCGCCCAGGCCCATGACGACCCTATCGATAAACGCAGCCTGGTCAGCCGGCTGCT > 5:370248/1‑149 GATGAATTCCGAGATCGACCGCGACGAGACCTCCAGGAATTCATCGACAGCAACATGCGCGTGGTGACGCAGATCATCCTCGAAGAAAAAAGCGCCCAGGCCCATGACGACCCTATCGATAAACGCAGCCTGGTCAGCCGGCTGCTCGA > 7:94986/1‑149 ATTCCGAGATCGACCGCGACGAGACCTCCAGGAATTCATCGACAGCAACATGCGCGTGGTGACGCAGATCATCCTCGAAGAAAAAAGCGCCCAGGCCCATGACGACCCTATCGATAAACGCAGCCTGGTCAGCCGGCTGCTCGATGGCA < 8:94986/149‑1 GACGAGACCTCCAGGAATTCATCGACAGCAACATGCGCGTGGTGACGCAGATCATCCTCGAAGAAAAAAGCGCCCAGGCCCATGACGACCCTATCGATAAACGCAGCCTGGTCAGCCGGCTGCTCGATGGCAGGGATGTGGACGCGGAG < 6:370248/149‑1 TCATCGACAGCAACATGCGCGTGGTGACGCAGATCATCCTCGAAGAAAAAAGCGCCCAGGCCCATGACGACCCTATCGATAAACGCAGCCTGGTCAGCCGGCTGCTCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTG > 4:13375/1‑149 CTGCCATCGAGCAGCCGGCTGACCAGGCTGCGTTTATCGATAGGGTCGTCATGGGCCTGGGCGCTTTTTTCTTCGAGGATGATCTGCGTCACCACGCGCATGTTGCTGTCGATGAATTCCGAGATCGACCGCGACGAGACCTCCAGGAATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3211526‑3211375‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaattcATCGACAGCAACATGCGCGTGGTGACGCAGATCATCCTCGAAGAAAAAAGCGCCCAGGCCCATGACGACCCTATCGATAAACGCAGCCTGGTCAGCCGGCTGCTCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTG > NC_002947/3211414‑3211560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |