New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3387771 | 46 (0.830) | 6 (0.120) | 6/240 | NT | 10.4% | coding (552/795 nt) | PP_2989 | short‑chain dehydrogenase/reductase family oxidoreductase |
? | NC_002947 | = 3387797 | 60 (1.160) | coding (578/795 nt) | PP_2989 | short‑chain dehydrogenase/reductase family oxidoreductase |
TGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3387618‑3387771 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcaCGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGCGCA < NC_002947/3387797‑3387651 TGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGC < 7:180379/149‑1 GCGATCGTCAACGTGGGTTCAGTGGGGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCC < 1:334873/149‑1 AGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGG > 3:263155/1‑149 CGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCC < 3:295083/149‑1 CGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGC < 3:328131/148‑1 GAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAG < 4:263155/149‑1 ATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTG < 5:326326/127‑1 ATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTG > 6:326326/1‑127 TGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCG < 7:132407/149‑1 CCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGG < 1:241512/148‑1 CGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGC < 3:137455/149‑1 CGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGC > 7:247362/1‑149 CACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGCGCA < 2:42595/149‑1 CACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGCGCA < 3:163909/149‑1 CACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGCGC > 1:159301/1‑148 TGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3387618‑3387771 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcaCGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGCGCA < NC_002947/3387797‑3387651 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |