New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 338777146 (0.830)6 (0.120) 6/240 NT 10.4% coding (552/795 nt) PP_2989 short‑chain dehydrogenase/reductase family oxidoreductase
?NC_002947 = 3387797 60 (1.160)coding (578/795 nt) PP_2989 short‑chain dehydrogenase/reductase family oxidoreductase

TGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3387618‑3387771
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcaCGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGCGCA  <  NC_002947/3387797‑3387651
                                                                                                                                                                                                                                                                                                             
TGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGC                                                                                                                                                          <  7:180379/149‑1
 GCGATCGTCAACGTGGGTTCAGTGGGGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCC                                                                                                                                                         <  1:334873/149‑1
                     AGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGG                                                                                                                                     >  3:263155/1‑149
                                   CGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCC                                                                                                                       <  3:295083/149‑1
                                   CGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGC                                                                                                                        <  3:328131/148‑1
                                        GAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAG                                                                                                                  <  4:263155/149‑1
                                                       ATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTG                                                                                                                         <  5:326326/127‑1
                                                       ATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTG                                                                                                                         >  6:326326/1‑127
                                                                                                                                                  TGCCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCG        <  7:132407/149‑1
                                                                                                                                                    CCGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGG       <  1:241512/148‑1
                                                                                                                                                     CGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGC     <  3:137455/149‑1
                                                                                                                                                     CGGCACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGC     >  7:247362/1‑149
                                                                                                                                                        CACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGCGCA  <  2:42595/149‑1
                                                                                                                                                        CACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGCGCA  <  3:163909/149‑1
                                                                                                                                                        CACGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGCGC   >  1:159301/1‑148
                                                                                                                                                                                                                                                                                                             
TGCGATCGTCAACGTGGGTTCAGTGGTGGGTTTTGCGCCCGAGTTCGGCATGTCCATCTACGGCGCTACCAAAGCCTTCGTGCTGTTTCTGTCACAGGGGCTGAGTCAGGAGCTGTCACCCAAGGGCGTGTACGTGCAAGCGGTGCTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3387618‑3387771
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcaCGCGCCCAGATCTCGGTGCGGGTCGCTGCCGGCAGCACCGCTTGCACGTACACGCCCTTGGGTGACAGCTCCTGACTCAGCCCCTGTGACAGAAACAGCACGAAGGCTTTGGTAGCGCCGTAGATGGACATGCCGAACTCGGGCGCA  <  NC_002947/3387797‑3387651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.