New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3555686	72 (1.300)	4 (0.080)	3/246	NT	5.3%	coding (103/1188 nt)	PP_3140	group 2 family glycosyl transferase
	?	NC_002947	= 3555711	75 (1.410)					coding (128/1188 nt)	PP_3140	group 2 family glycosyl transferase

ACATCGATACCGAGGCGGCCAGGCTGGCCGACTATTTCAAGGCATACGCATGATAAGTGTATTGGGTTGGTTACTGGGCCTGTTGGCGATCATCGTCCTGGTACCGGTGTCGGTGCTGTTGCTGCAAGTGTTGCTGGCTTGCCTGCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3555535‑3555686 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTCGCCAATGCCCTTGGGCCTGGACCGCGCCGGC  <  NC_002947/3555711‑3555679                                                                                                                                                                                           ACATCGATACCGAGGCGGCCAGGCTGGCCGACTATTTCAAGGCATACGCATGATAAGTGTATTGGGTTGGTTACTGGGCCTGTTGGCGATCATCGTCCTGGTACCGGTGTCGGTGCTGTTGCTGCAAGTGTTGCTGGCTTGCCTGCCG                                       <  3:351759/148‑1       ATACCGAGGCGGCCAGGCTGGCCGACTATTTCAAGGCATACGCATGATAAGTGTATTGGGTTGGTTACTGGGCCTGTTGGCGATCATCGTCCTGGTACCGGTGTCGGTGCTGTTGCTGCAAGTGTTGCTGGCTTGCCTGCCGGCGCTCG                                >  6:242996/1‑149                                      CAAGGCATACGCATGATAAGTGTATTGGGTTGGTTACTGGGCCTGTTGGCGATCATCGTCCTGGTACCGGTGTCGGTGCTGTTGCTGCAAGTGTTGCTGGCTTGCCTGCCGGCGCTCGCCAATGCCCTTGGGCCTGGACCGCGCCGGC  <  3:65131/148‑1                                      CAAGGCATACGCATGATAAGTGTATTGGGTTGGTTACTGGGCCTGTTGGCGATCATCGTCCTGGTACCGGTGTCGGTGCTGTTGCTGCAAGTGTTGCTGGCTTGCCTGCCGGCGCTCGCCAATGCCCTTGGGCCTGGACCGCGCCGGC  <  5:242996/148‑1                                          GCATACGCATGATAAGTGTATTGGGTTGGTTACTGGGCCTGTTGGCGATCATCGTCCTGGTACCGGTGTCGGTGCTGTTGCTGCAAGTGTTGCTGGCTTGCCTGCCGGCGCTCGCCAATGCCCTTGGGCCTGGACCGCGC      >  7:130421/1‑140                                          GCATACGCATGATAAGTGTATTGGGTTGGTTACTGGGCCTGTTGGCGATCATCGTCCTGGTACCGGTGTCGGTGCTGTTGCTGCAAGTGTTGCTGGCTTGCCTGCCGGCGCTCGCCAATGCCCTTGGGCCTGGACCGCGC      <  8:130421/140‑1                                                                                                                                                                                           ACATCGATACCGAGGCGGCCAGGCTGGCCGACTATTTCAAGGCATACGCATGATAAGTGTATTGGGTTGGTTACTGGGCCTGTTGGCGATCATCGTCCTGGTACCGGTGTCGGTGCTGTTGCTGCAAGTGTTGCTGGCTTGCCTGCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3555535‑3555686 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTCGCCAATGCCCTTGGGCCTGGACCGCGCCGGC  <  NC_002947/3555711‑3555679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.