| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3883650 | 70 (1.260) | 4 (0.080) | 4/234 | NT | 5.9% | coding (669/1056 nt) | PP_3428 | TPR repeat‑containing protein |
| ? | NC_002947 | = 3883683 | 64 (1.270) | coding (702/1056 nt) | PP_3428 | TPR repeat‑containing protein | |||||
CCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3883495‑3883650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgccagggcTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGGCGCTCGAGCAGGCGTACCTGAGTCGCCAGGGCATCGAGGTTGCCGGGGGCAACCGCGAGCGCTCGCTGCAGGGCTGCAGCGGCGTGCGTGTAGTCGTTTTCGTGCAGG < NC_002947/3883683‑3883536 CCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGC > 3:82964/1‑148CCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGC < 4:82964/148‑1 AAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAG > 1:328085/1‑149 ACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGG < 5:283712/94‑1 ACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGG > 6:283712/1‑94 AGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGG > 5:306670/1‑114 AGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGG < 6:306670/114‑1 GCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGGCGCT < 5:5073/107‑1 GCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGGCGCT > 6:5073/1‑107 AGCGCCAGGGCTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGGCGCTCGAGCAGGCGTACCTGAGTCGCCAGGGCATCGAGGTTGCCGGGGGCAACCGCGAGCGCTCGCTGCAGGGCTGCAGCGGCGTGCGTGTAGTCGTT > 3:330447/1‑149 AGCGCCAGGGCTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGGCGCTCGAGCAGGCGTACCTGAGTCGCCAGGGCATCGAGGTTGCCGGGGGCAACCGCGAGCGCTCGCTGCAGGGCTGCAGCGGCGTGCGTGTAGTCG < 5:358777/147‑1 GCCAGGGCTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGGCGCTCGAGCAGGCGTACCTGAGTCGCCAGGGCATCGAGGTTGCCGGGGGCAACCGCGAGCGCTCGCTGCAGGGCTGCAGCGGCGTGCGTGTAGTCGTTTTC < 2:293610/149‑1 CAGGGCTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGGCGCTCGAGCAGGCGTACCTGAGTCGCCAGGGCATCGAGGTTGCCGGGGGCAACCGCGAGCGCTCGCTGCAGGGCTGCAGCGGCGTGCGTGTAGTCGTTTTCGT < 4:330447/149‑1 CAGGGCTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGGCGCTCGAGCAGGCGTACCTGAGTCGCCAGGGCATCGAGGTTGCCGGGGGCAACCGCGAGCGCTCGCTGCAGGGCTGCAGCGGCGTGCGTGTAGTCGTTTTCGT > 7:311077/1‑149 GCTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGGCGCTCGAGCAGGCGTACCTGAGTCGCCAGGGCATCGAGGTTGCCGGGGGCAACCGCGAGCGCTCGCTGCAGGGCTGCAGCGGCGTGCGTGTAGTCGTTTTCGTGCAG < 8:311077/149‑1 CTTTGCCCAGCACGTGGCGGGAGGCGTCGTGGTGGCCCTGGCGCTCGAGCAGGCGTACCTGAGTCGCCAGGGCATCGAGGTTGCCGGGGGCAACCGCGAGCGCTCGCTGCAGGGCTGCAGCGGCGTGCGTGTAGTCGTTTTCGTGCAGG < 5:40376/149‑1 CCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3883495‑3883650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgccagggcTTTGCCCAGCACCTGGCGGGAGGCGTCGTGGTGGCCCTGGCGCTCGAGCAGGCGTACCTGAGTCGCCAGGGCATCGAGGTTGCCGGGGGCAACCGCGAGCGCTCGCTGCAGGGCTGCAGCGGCGTGCGTGTAGTCGTTTTCGTGCAGG < NC_002947/3883683‑3883536 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |