| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4007382 | 52 (0.940) | 3 (0.060) | 3/238 | NT | 6.3% | coding (494/1791 nt) | PP_3535 | gamma‑glutamyltransferase |
| ? | NC_002947 | = 4007435 | 41 (0.800) | coding (441/1791 nt) | PP_3535 | gamma‑glutamyltransferase | |||||
CCACGGCCAGCGGCCTGCCCTGTTCATCCAGGAAGTAACGGGCCATTGCGGGTGAGCGGGCAATGTAGGGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAAACCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGGGCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4007227‑4007382‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgtgccCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCACGCCCTGTTCGCCCCGGCCATCGCCTTGGCACGCAACGGCTTCGCGGTTTCCGAGCGCCTGCACACACTACTGGCCGGGGACCCCTACATT < NC_002947/4007435‑4007288 CCACGGCCAGCGGCCTGCCCTGTTCATCCAGGAAGTAACGGGCCATTGCGGGTGAGCGGGCAATGTAGGGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAAACCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGG > 4:186607/1‑149CCACGGCCAGCGGCCTGCCCTGTTCATCCAGGAAGTAACGGGCCATTGCGGGTAAGCGGGCAATGTAGGGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAAACCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGG > 1:272487/1‑149 CACGGCCAGCGGCCTGCCCTGTTCATCCAGGAAGTAACGGGCCATTGCGGGTGAGCGGGCAATGTAGGGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAAACCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGGG > 2:24872/1‑149 CACGGCCAGCGGCCTGCCCTGTTCATCCAGGAAGTAACGGGCCATTGCGGGTGAGCGGGCAATGTAGGGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAAACCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGGG < 8:239446/149‑1 GGCCAGCGGCCTGCCCTGTTCATCCAGGAAGTAACGGGCCATTGCGGGTGAGCGGGCAATGTAGGGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAAACCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGGGCGT < 7:214929/149‑1 TGTTCATCCAGGAAGTAACGGGCCATTGCGGGTGAGCGGGCAATGTAGGGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAACCCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGGGC > 8:36750/1‑131 TGTTCATCCAGGAAGTAACGGGCCATTGCGGGTGAGCGGGCAATGTAGGGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAAACCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGGGC < 7:36750/131‑1 TAGGGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAAACCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGGGCGTGCCCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCAC < 3:186607/149‑1 TAGGGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAAACCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGGGCGTGCCCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCAC > 4:166693/1‑149 GGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAAACCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGGGCGTGCCCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCACGCC < 3:166693/149‑1 GGGCGTGCCCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCACGCCCTGTTCGCCCCGGCCATCGCCTTGGCACGCAACGGCTTCGCGGTTTCCGAGCGCCTGCACACACTACTGGCCGGG < 1:329779/145‑1 GGGCGTGCCCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCACGCCCTGTTCGCCCCGGCCATCGCCTTGGCACGCAACGGCTTCGCGGTTTCCGAGCGCCTGCACACACTACTGGCCGGG > 2:329779/1‑145 GCGTGCCCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCACGCCCTGTTCGCCCCGGCCATCGCCTTGGCACGCAACGGCTTCGCGGTTTCCGAGCGCCTGCACACACTACTGGCCGGGGACCCC > 5:219478/1‑149 CCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCACGCCCTGTTCGCCCCGGCCATCGCCTTGGCACGCAACGGCTTCGCGGTTTCCGAGCGCCTGCACACACTACTGGCCGGGGACCCCTACATT > 6:228610/1‑149 CCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCACGCCCTGTTCGCCCCGGCCATCGCCTTGGCACGCAACGGCTTCGCGGTTTCCGAGCGCCTGCACACACTACTGGCCGGGGACCCC < 4:336088/143‑1 CCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCACGCCCTGTTCGCCCCGGCCATCGCCTTGGCACGCAACGGCTTCGCGGTTTCCGAGCGCCTGCACACACTACTGGCCGGGGACCCC > 3:336088/1‑143 CCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCACGCCCTGTTCGCCCCGGCCATCGCCTTGGCACGCAACGGCTTCGCGGTTTCCGAGCGCCTGCA < 5:74430/121‑1 CCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCACGCCCTGTTCGCCCCGGCCATCGCCTTGGCACGCAACGGCTTCGCGGTTTCCGAGCGCCTGCA > 6:74430/1‑121 CCACGGCCAGCGGCCTGCCCTGTTCATCCAGGAAGTAACGGGCCATTGCGGGTGAGCGGGCAATGTAGGGGTCCCCGGCCAGTAGTGTGTGCAGGCGCTCGGAAACCGCGAAGCCGTTGCGTGCCAAGGCGATGGCCGGGGCGAACAGGGCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4007227‑4007382‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgtgccCGGGGTGCTGCGTGCCCTGAAGCAGGCCCACGAGCAGCACGGCAAGTTGCCCTGGCACGCCCTGTTCGCCCCGGCCATCGCCTTGGCACGCAACGGCTTCGCGGTTTCCGAGCGCCTGCACACACTACTGGCCGGGGACCCCTACATT < NC_002947/4007435‑4007288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |