New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4010418 = | 52 (0.940) | 4 (0.080) | 4/242 | NT | 7.4% | coding (202/1188 nt) | pobA | 4‑hydroxybenzoate 3‑monooxygenase |
? | NC_002947 | 4010468 = | 51 (0.970) | coding (152/1188 nt) | pobA | 4‑hydroxybenzoate 3‑monooxygenase |
CTGGGCCAGCTGCTGCACAAGGCCGGTATCGATAACATCATCGTCGAACGCCAGACTGCCGAGTACGTACTAGGCCGCATCCGCGCCGGGGTGCTAGAGCAAGGCACGGTCGACCTGCTGCGCGAGGCTGGCGTGGCCGAGCGCATGGACCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4010571‑4010418 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccgtgCCTTGCTCTAGCACCCCGGCGCGGATGCGGCCTAGTACGTACTCGGCAGTCTGGCGTTCGACGATGATGTTATCGATACCGGCCTTGTGCAGCAGCTGGCCCAGCAGCAGGCCAGACGGACCTGCACCAATAATTGCAACCTGAG > NC_002947/4010468‑4010612 CTGGGCCAGCTGCGTCACAAGGCCGGTATCGATAACATCATCGTCGACCGCCAGACTGCCGAGTACGTACTACGCCGCATCCGCGCCGGGGTGCTAGAGCAAGGCACGGTCGACCTGCTGCGCGAGGCTGGCGTGACCGAGCGCATGGA < 6:68542/149‑1 CCAGCTGCTGCACAAGGCCGGTATCGATAACATCATCGTCGAACGCCAGACTGCCGAGTACGTACTAGGCCGCATCCGCGCCGGGGTGCTAGAGCAAGGCACGGTCGACCTGCTGCGCGAGGCTGGCGTGGCCGAGCGCATGGACCGTG < 4:344469/149‑1 CCAGCTGCTGCACAAGGCCGGTATCGATAACATCATCGTCGAACGCCAGACTGCCGAGTACGTACTAGGCCGCATCCGCGCCGGGGTGCTAGAGCAAGGCACGGTCGACCTGCTGCGCGAGGCTGGCGTGGCCGAGCGCATGGACCGT > 5:120327/1‑148 AGCTGCTGCACAAGGCCGGTATCGATAACATCATCGTCGAACGCCAGACTGCCGAGTACGTACTAGGCCGCATCCGCGCCGGGGTGCTAGAGCAAGGCACGGTCGACCTGCTGCGCGAGGCTGGCGTGGCCGAGCGCATGGACCGTG > 2:80998/1‑147 GGCACGGTCGACCTGCTGCGCGAGGCTGGCGTGGCCGAGCGCATGGACCGTGCCTTGCTCTAGCACCCCGGCGCGGATGCGGCCTAGTACGTACTCGGCAGTCTGGCGTTCGACGATGATGTTATCGATACCGGCCTTGTGCAGCAGCT > 4:195517/1‑149 GCGAGGCTGGCGTGGCCGAGCGCATGGACCGTGCCTTGCTCTAGCACCCCGGCGCGGATGCGGCCTAGTACGTACTCGGCAGTCTGGCGTTCGACGATGATGTTATCGATACCGGCCTTG > 5:96984/1‑120 GCGAGGCTGGCGTGGCCGAGCGCATGGACCGTGCCTTGCTCTAGCACCCCGGCGCGGATGCGGCCTAGTACGTACTCGGCAGTCTGGCGTTCGACGATGATGTTATCGATACCGGCCTTG < 6:96984/120‑1 GAGCGCATGGACCGTGCCTTGCTCTAGCACCCCGGCGCGGATGCGGCCTAGTACGTACTCGGCAGTCTGGCGGTCGACGATCATGTTATCGATACCGGCCTTGTGCAGCACCTGGCCCAGCAGCAGGCCAGACGGACCTGCACCAATAA < 3:195517/149‑1 CCGTGCCTTGCTCTAGCACCCCGGCGCGGATGCGGCCTAGTACGTACTCGGCAGTCTGGCGTTCGACGATGATGTTATCGATACCGGCCTTGTGCAGCAGCTGGCCCAGCAGCAGGCCAGACGGACCTGCACCAATAATTGCAACCT > 5:198527/1‑147 CCGTGCCTTGCTCTAGCACCCCGGCGCGGATGCGGCCTAGTACGTACTCGGCAGTCTGGCGTTCGACGATGATGTTATCGATACCGGCCTTGTGCAGCAGCTGGCCCAGCAGCAGGCCAGAC < 3:133834/122‑1 CCGTGCCTTGCTCTAGCACCCCGGCGCGGATGCGGCCTAGTACGTACTCGGCAGTCTGGCGTTCGACGATGATGTTATCGATACCGGCCTTGTGCAGCAGCTGGCCCAGCAGCAGGCCAGAC > 4:133834/1‑122 CGTGCCTTGCTCTAGCACCCCGGCGCGGATGCGGCCTAGTACGTACTCGGCAGTCTGGCGTTCGACGATGATGTTATCGATACCGGCCTTGTGCAGCAGCTGGCCCAGCAGCAGGCCAGACGGACCTGCACCAATAATTGCAACCTGAG > 8:105875/1‑149 CTGGGCCAGCTGCTGCACAAGGCCGGTATCGATAACATCATCGTCGAACGCCAGACTGCCGAGTACGTACTAGGCCGCATCCGCGCCGGGGTGCTAGAGCAAGGCACGGTCGACCTGCTGCGCGAGGCTGGCGTGGCCGAGCGCATGGACCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4010571‑4010418 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccgtgCCTTGCTCTAGCACCCCGGCGCGGATGCGGCCTAGTACGTACTCGGCAGTCTGGCGTTCGACGATGATGTTATCGATACCGGCCTTGTGCAGCAGCTGGCCCAGCAGCAGGCCAGACGGACCTGCACCAATAATTGCAACCTGAG > NC_002947/4010468‑4010612 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |