| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4056568 = | 59 (1.070) | 7 (0.130) | 6/240 | NT | 12.1% | coding (1094/2406 nt) | PP_3575 | ferric siderophore receptor |
| ? | NC_002947 | 4056638 = | 46 (0.890) | coding (1024/2406 nt) | PP_3575 | ferric siderophore receptor | |||||
ACCGAATGGGACCACCAGCGCGTCGACCGCGAAATGGCGGTGCTGGGCCTGGATTTTCGAGGCGAGCGCCTGCGTCTCTCGGCAGACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4056722‑4056568‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaggtCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCAAAGCGAC > NC_002947/4056638‑4056784 ACCGAATGGGACCACCAGCGCGTCGACCGCGAACTGGCGGTGCTGGGCCTGGATGTTCGAGGCGAGCGCCTGCGTCTCTCGGCAGACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATG < 7:321939/148‑1ACCGAATGGGACCACCAGCGCGTCGACCGCGAAATGGCGGTGCTGGGCCTGGATTTTCGAGGCGAGCGCCTGCGTCTCTCGGCAGACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGC > 7:58202/1‑149 CGAATGGGACCACCAGCGCGTCGACCGCGAAATGGCGGTGCTGGGCCTGGATTTTCGAGGCGAGCGCCTGCGTCTCTCGGCAGACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCC > 2:321311/1‑148 CAGACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTC > 7:94788/1‑149 AGACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGC > 3:221053/1‑129 AGACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGC < 4:221053/129‑1 CTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATT > 1:295123/1‑149 CTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATT > 1:73226/1‑149 CCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTA < 2:295123/149‑1 CTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCAC < 2:73226/149‑1 CAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCAAAG > 3:8275/1‑149 AGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCAAAGCG < 1:114292/149‑1 GTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCAAAGCGAC > 5:211547/1‑149 GTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCAAAGCGAC > 8:203860/1‑149 ACCGAATGGGACCACCAGCGCGTCGACCGCGAAATGGCGGTGCTGGGCCTGGATTTTCGAGGCGAGCGCCTGCGTCTCTCGGCAGACCTTGGCCACACCGAACGCGACACTGACGCCCCGCAGGAGCGTGTGCTGGTCGGTGCCAATGCCAAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4056722‑4056568‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaggtCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCAAAGCGAC > NC_002947/4056638‑4056784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |