New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4079665	72 (1.300)	5 (0.090)	5/246	NT	6.6%	coding (1112/1197 nt)	amaC	D‑lysine aminotransferase
	?	NC_002947	= 4079706	72 (1.350)					coding (1071/1197 nt)	amaC	D‑lysine aminotransferase

GCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4079514‑4079665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgaGCAGGTACGTCGCCTGCGTGACGAGTTCGGCGTGTACCTGATCGACAGCGGCCGTGTGTGCATGTCCGGCCTGCGCCCGGCCAACCTGCAACGGGTTGCCGAAGCGTTCGCTGCCGTTCAGAAGTAACTCGCCAACGGGCCAACTGC  <  NC_002947/4079706‑4079560                                                                                                                                                                                                                                                                                                             GCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGT                                                                                                                                                        >  7:58095/1‑149  CAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTC                                                                                                                                                       <  8:58095/149‑1                                                 AGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGAGCAGGTACGTCGCCTGCGTGACGAGTTCGGCGTGTACCTGATCGA                                                                                                        <  8:59434/149‑1                                                        CCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAGGTACGTCGCCTGCGTGACGAGTTCGGCGTGTAC                                                                                                                >  3:44603/1‑134                                                        CCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGATCAGGTACGTCGCCTGCGTGACGAGTTCGGCGTGTAC                                                                                                                <  4:44603/134‑1                                                                         CTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGAGCAGGTACGTCGCCTGCGTGACGAGTTCGGCGTGTACCTGATCGACAGC                                                                                                    >  3:63243/1‑129                                                                         CTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGAGCAGGTACGTCGCCTGCGTGACGAGTTCGGCGTGTACCTGATCGACAGC                                                                                                    <  4:63243/129‑1                                                                                                                                                       GAGCAGGTACGTCGCCTGCGTGACGAGTTCGGCGTGTACCTGATCGACAGCGGCCGTGTGTGCATGTCCGGCCTGCGCCCGGCCAACCTGCAACGGGTTGCCGAAGCGTTCGCTGCCGTTCAGAAGTAACTCGCCAACGGGCCAACTGC  <  3:90670/149‑1                                                                                                                                                       GAGCAGGTACGTCGCCTGCGTGACGAGTTCGGCGTGTACCTGATCGACAGCGGCCGTGTGTGCATGTCCGGCCTGCGCCCGGCCAACCTGCAACGGGTTGCCGAAGCGTTCGCTGCCGTTCAGAAGTAACTCGCCAACGGGCCAACTGC  <  6:69441/149‑1                                                                                                                                                                                                                                                                                                             GCAAGGCCGCTCCCACAAAGTCCAACCGCGCCCCACAGGAGGGGCCGCAGTTGGCCCGTTGGCGAGTTACTTCTGAACGGCAGCGAACGCTTCGGCAACCCGTTGCAGGTTGGCCGGGCGCAGGCCGGACATGCACACACGGCCGCTGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4079514‑4079665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgaGCAGGTACGTCGCCTGCGTGACGAGTTCGGCGTGTACCTGATCGACAGCGGCCGTGTGTGCATGTCCGGCCTGCGCCCGGCCAACCTGCAACGGGTTGCCGAAGCGTTCGCTGCCGTTCAGAAGTAACTCGCCAACGGGCCAACTGC  <  NC_002947/4079706‑4079560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.