| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4241462 = | 52 (0.940) | 4 (0.070) | 4/248 | NT | 7.5% | coding (237/1413 nt) | PP_3718 | aminotransferase |
| ? | NC_002947 | 4241492 = | 49 (0.910) | coding (207/1413 nt) | PP_3718 | aminotransferase | |||||
TGTTCGACGAGCACCGCGAGCAAGGTGCGTTGAACATCGTCGCCGGTGAGGGCGCCTACATTCGTGACACCCACGGCAACCGCTTCCTCGATGCCGTCGGCGGCATGTGGTGCACCAACATCGGCCTGGGCCGCGAGGAAATGGCCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4241613‑4241462‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccGATGTTGGTGCACCACATGCCGCCGACGGCATCGAGGAAGCGGTTGCCGTGGGTGTCACGAATGTAGGCGCCCTCACCGGCGACGATGTTCAACGCACCTTGCTCGCGGTGCTCGTCGAACACATGGTAGCCGTGCATGTAGTGGGCC > NC_002947/4241492‑4241639 TGTTCGACGAGCACCGCGAGCAAGGTGCGTTGAACATCGTCGCCGGTGAGGGCGCCTACATTCGTGACACCCACGGCAACCGCTTCCTCGATGCCGTCGGCGGCATGTGGTGCACCAACATCGGCCTGGGCCGCGAGGAAATGGCCCTG < 2:180693/149‑1 ACCAACATCGGCCTGGGCCGCGAGGAAATGGCCCTGGCCGATGTTGGTGCACCACATGCCGCCGACGGCATCGAGGAAGCGGTTGCC > 1:83564/1‑87 ACCAACATCGGCCTGGGCCGCGAGGAAATGGCCCTGGCCGATGTTGGTGCACCACATGCCGCCGACGGCATCGAGGAAGCGGTTGCC < 2:83564/87‑1 CATCGGCCTGGGCCGCGAGGAAATGGCCCTGGCCGATGTTGGTGCACCACATGCCGCCGACGGCATCGAGGAAGCGGTTGCCGTGGGTGTCAC < 5:66879/93‑1 CATCGGCCTGGGCCGCGAGGAAATGGCCCTGGCCGATGTTGGTGCACCACATGCCGCCGACGGCATCGAGGAAGCGGTTGCCGTGGGTGTCAC > 6:66879/1‑93 GCCGATGTTGGTGCACCACATGCCGCCGACGGCATCGAGGAAGCGGTTGCCGTGGGTGTCACGAATGTAGGCGCCCTCACCGGCGACGATGTTCAACGCACCTTGCTCGCGGTGCTCGTCGAACACATGGTAGCCGTGCATGTAGTGGG > 1:172706/1‑149 CGATGTTGGTGCACCACATGCCGCCGACGGCATCGAGGAAGCGGTTGCCGTGGGTGTCACGAATGTAGGCGCCCTCACCGGCGACGATGTTCAACGCACCTTGCTCGCGGTGCTCGTCGAACACATGGTAGCCGTGCATGTAGTGGGCC > 2:314742/1‑149 CGATGTTGGTGCACCACATGCCGCCGACGGCATCGAGGAAGCGGTTGCCGTGGGTGTCACGAATGTAGGCGCCCTCACCGGCGACGATGTTCAACGCACCTTGCTCGCGGTGCTCGTCGAACACATGGTAGCCGTGCATGTAGTGGGCC < 5:24779/149‑1 CGATGTTGGTGCACCACATGCCGCCGACGGCATCGAGGAAGCGGTTGCCGTGGGTGTCACGAATGTAGGCGCCCTCACCGGCGACGATGTTCAACGCACCTTGCTCGCGGTGCTCGTCGAACACATGGTAGCC < 7:90701/133‑1 CGATGTTGGTGCACCACATGCCGCCGACGGCATCGAGGAAGCGGTTGCCGTGGGTGTCACGAATGTAGGCGCCCTCACCGGCGACGATGTTCAACGCACCTTGCTCGCGGTGCTCGTCGAACACATGGTAGCC > 8:90701/1‑133 TGTTCGACGAGCACCGCGAGCAAGGTGCGTTGAACATCGTCGCCGGTGAGGGCGCCTACATTCGTGACACCCACGGCAACCGCTTCCTCGATGCCGTCGGCGGCATGTGGTGCACCAACATCGGCCTGGGCCGCGAGGAAATGGCCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4241613‑4241462‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccGATGTTGGTGCACCACATGCCGCCGACGGCATCGAGGAAGCGGTTGCCGTGGGTGTCACGAATGTAGGCGCCCTCACCGGCGACGATGTTCAACGCACCTTGCTCGCGGTGCTCGTCGAACACATGGTAGCCGTGCATGTAGTGGGCC > NC_002947/4241492‑4241639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |