| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4433951 = | 50 (0.900) | 5 (0.100) | 5/238 | NT | 10.4% | intergenic (+99/‑64) | PP_3928/PP_3929 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 4433995 = | 40 (0.780) | intergenic (+143/‑20) | PP_3928/PP_3929 | hypothetical protein/hypothetical protein | |||||
CACGATATAGGTCCTTGATCCGCATAGGTTTACGGGGCACCTTTTAAGACTGGGACCGATCGATTTGGTTTCCCGGGCGGGCAAAAAAATTATGCTTCAAGTGATCAGCGCCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4434098‑4433951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgctgaTCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCTCACGCGTCTTGCAAGCCTTTCTCTGGTTGCTGTTGTCCTG > NC_002947/4433995‑4434140 CACGATATAGGTCCTTGATCCGCATAGGTTTACGGGGCACCTTTTAAGACTGGGACCGATCGATTTGGTTTCCCGGGCGGGCAAAAAAATTATGCTTCAAGTGATCAGCGCCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGAa > 7:84307/1‑148 ATAGGTCCTTGATCCGCATAGGTTTACGGGGCACCTTTTAAGACTGGGACCGATCGATTTGGTTTCCCGGGCGGGCAAAAAAATTATGCTTCAAGTGATCAGCGCCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCT < 7:240816/140‑1 ATCAGCGCCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTG > 3:39229/1‑149 CAGCGCCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCT > 3:248565/1‑149 CAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATC > 5:103861/1‑80 CAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATC < 6:103861/80‑1 TCCGTCTGAAAGAACGGGCTGTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCTCACGCGTCTTGCA < 4:39229/149‑1 GGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCTCACGCGTCTTGCAAGCCTTTCTCTGGTTGCTGTT < 1:316333/148‑1 GCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCTCACGCGTCTTGCAAGCCTTTCTCTGGTTGCTGTTG < 5:7117/148‑1 CTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCTCACGCGTCTTGCAAGCCTTTCTCTGGTTGCTGTTGTCCT < 5:219234/149‑1 CTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCTCACGCGTCTTGCAAGCCTTTCTCTGGTTGCTGTTGTCCT < 8:132138/149‑1 ATCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATCGATCGGTCCCAGTCTTCAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCTCACGCGTCTTGCAAGCCTTTCTCTGGTTGCTGTTGTCCTG < 7:188008/147‑1 CACGATATAGGTCCTTGATCCGCATAGGTTTACGGGGCACCTTTTAAGACTGGGACCGATCGATTTGGTTTCCCGGGCGGGCAAAAAAATTATGCTTCAAGTGATCAGCGCCAAGGCGTCCGTCTGAAAGAACGGGCTGTGGCGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4434098‑4433951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgctgaTCACTTGAAGCATAATTTTTTTGCCCGCCCGGGAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCTCACGCGTCTTGCAAGCCTTTCTCTGGTTGCTGTTGTCCTG > NC_002947/4433995‑4434140 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |