| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4536483 = | NA (NA) | 6 (0.110) | 4/242 | NT | 13.7% | coding (196/360 nt) | PP_4024 | transposase |
| ? | NC_002947 | = 4627665 | 40 (0.720) | coding (217/360 nt) | PP_4092 | transposase | |||||
AGTCAAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAgaagccg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4536629‑4536483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGCCGAGCGTTTCAAAACTTCACCCAACGCGACCGACGAAGCTATCGTACTGACCGTCCAGGAACTGAATTGGCTACTCGACGGTTTCGATCTCTGGCGCAACCGT‑CCGCATCAGGTTTTGACTCCTCGTTTCGTCGCCTGACCGGGT < NC_002947/4627665‑4627516 AGTCAAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGA < 4:298186/149‑1 GTCAAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAG > 6:215049/1‑147 TCAAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAG > 2:95095/1‑149 TCAAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAG < 4:192976/149‑1 TCAAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAG > 4:2913/1‑149 AAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCC > 2:273753/1‑149 AAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCC > 3:118531/1‑149 AAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCC > 8:243532/1‑149 AAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCC > 4:231137/1‑149 AAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAAATCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCC > 5:15281/1‑149 AAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCCG < 7:243532/149‑1 AAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCCG > 7:127120/1‑149 GTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAA < 8:284160/91‑1 GTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAA > 7:284160/1‑91 CGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCCGAGCGTTTCAAAACTTCACCCGACGCGACCGACGAAGCTATCGTACTGACCGTCCAGGAACTGAATTGGCTACTCGACGGTTTCGATCTCTTTCGCAACCGT‑CCGCATCAG > 2:203575/1‑149 GCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCCGAGCGTTTCAAAACTTCACCCAACGCGACCGACGAAGCTATCTTACTGACCGTCCAGGAACTGAATTGGCTACTCGACGGTTT > 8:68525/1‑120 GCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCCGAGCGTTTCAAAACTTCACCCAACGCGACCGACGAAGCTATCGTACTGACCGTCCAGGAACTGAATTGGCTACTCGACGGTTT < 7:68525/120‑1 TCGGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCCGAGCGTTTCAAAACTTCACCCAACGCGACCGACGAAGCTATCGTACTGACCGTCCAGGAACTGAATTGGCTACTCGACGGTTTCGATCTCTGGCGCAACCGT‑CCGCATCAGGTT > 4:254693/1‑149 GGCTTCGAGGCGCTTGAGCCAAAGGCAGAAGCCGAGCGTTTCAAAACTTCACCCAACGCGACCGACGAAGCTATCGTACTGACCGTCCAGGAACTGAATTGGCTACTCGACGGTTTCGATCTCTGGCGCAACCGT‑CCGCATCAGGTTTT < 3:254693/149‑1 GCCAAAGGCAGAAGCCGAGCGTTTCAAAACTTCACCCGACGCGACCGACGAAGCTATCGTACTGACCGTCCAGGAACTTAATTGGCTACTCGACGGTTTCGATCTCTGGCGCAACCGTCCCGCATCAGGTTTTGACTCCTCGTTTCGTC < 1:203575/149‑1 GAAGCCGAGCGTTTCAAAACTTCACCCAACGCGACCGACGAAGCTATCGTACTGACCGTCCAGGAACTGAATTGGCTACTCGACGGTTTCGATCTCTGGCGCAACCAT‑CCGCATCAGGTTTTGACTCCTCGTTTCGTCGCCTGACCGG < 5:253035/148‑1 AAGCCGAGCGTTTCAAAACTTCACCCAACGCGACCGACGAAGCTATCGTACTGACCGTCCAGGAACTGAATTGGCTACTCGACGGTTTCGATCTCTGGCGCAACCGT‑CCGCATCAGGTTTTGACTCCTCGTTTCGTCGCCTGACCGGGT < 7:79826/149‑1 AGTCAAAACCTGATGCGGACGGTTGCGCCAGAGATCGAAACCGTCGAGTAGCCAATTCAGTTCCTGGACGGTCAGTACGATAGCTTCGTCGGTCGCGTCGGGTGAAGTTTTGAAACGCTCGGCTTCGAGGCGCTTGAGCCAAAGGCAgaagccg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4536629‑4536483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAGCCGAGCGTTTCAAAACTTCACCCAACGCGACCGACGAAGCTATCGTACTGACCGTCCAGGAACTGAATTGGCTACTCGACGGTTTCGATCTCTGGCGCAACCGT‑CCGCATCAGGTTTTGACTCCTCGTTTCGTCGCCTGACCGGGT < NC_002947/4627665‑4627516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |