New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4690131 | 43 (0.780) | 3 (0.060) | 3/244 | NT | 6.0% | coding (1011/1605 nt) | yejF | microcin C ABC transporter ATP‑binding protein |
? | NC_002947 | = 4690205 | 53 (1.000) | coding (1085/1605 nt) | yejF | microcin C ABC transporter ATP‑binding protein |
ATCAAGAAGGGCTTTCTGCAGCGCACGGTCGACCATGTGAAGGCGGTGGACGGGGTCAACTTCAGCTTGCCCCAGGGCCAGACGCTGGGCATTGTTGGCGAATCCGGGTCGGGCAAGTCCACATTGGGCCTGGCGATCTTGCGGCTGATTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4689979‑4690131 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atttccCGCCGCAGGGGGCGCACGGCTTTCTGGTTCAGCCCTTCGAGGTTCTGCCCATGAAAGCGAATGCCGCCCTGGCTGGAAATCAGCCGCAAGATCGCCAGGCCCAATGTGGACTTGCCCGACCCGGATTCGCCAACAATGCCCAGCGTCT < NC_002947/4690205‑4690058 ATCAAGAAGGGCTTTCTGCAGCGCACGGTCGACCATGTGAAGGCGGTGGACGGGGTCAACTTCAGCTTGCCCCAGGGCCAGACGCTGGGCATTGTTGGCGAATCCGGGTCGGGCAAGTCCACATTGGGCCTGGCGATCTTGCGGCTGAT < 2:109650/149‑1 AGAAGGGCTTTCTGCAGCGCACGGTCGACCATGTGAAGGCGGTGGACGGGGTCAACTTCAGCTTGCCCCAGGGCCAGACGCTGGGCATTGTTGGCGAATGCGGGTCGGGCAAGTCCACATTGGGCCTGGCGATCTTGCGGCTGATTTC > 6:292583/1‑148 GAAGGGCTTTCTGCAGCGCACGGTCGACCATGTGAAGGCGGTGGACGGGGTCAACTTCAGCTTGCCCCAGGGCCAGACGCTGGGGATTGTTGGCGAATCCGGGTCGCGCAAGTCCACATTGGGCCTGGCGATCTTGCGGCTGATTTaca < 5:250291/149‑4 GAAGGGCTTTCTGCAGCGCACGGTCGACCATGTGAAGGCGGTGGACGGGGTCAACTTCAGCTTGCCCCAGGGCCAGACGCTGGGCATTGTTGGCGAATCCGGGTCGGGCAAGTCCACATTGGGCCTGGCGATCTTGCGGCTGATTTC > 5:148573/1‑147 AGACGCTGGGCATTGTTGGCGAATCCGGGTCGGGCAAGTCCACATTGGGCCTGGCGATCTTGCGGCTGATTTCCCGCCGCAGGGGGCGCACGGCTTTCTGGTTCAGCCCTTCGAGGTTCTGCCCATGAAAGCGAATGCCGCCCTGGCTG > 4:147329/1‑149 GGCATTGTTGGCGAATCCGGGTCGGGCAAGTCCACATTGGGCCTGGCGATCTTGCGGCTGATTTCCCGCCGCAGGGGGCGCACGGCTTTCTGGTTCAGCCCTTCGAGGTTCTGCCCATGAAAGCGAATGCCGCCCTGGCTGGAAATCAG < 3:147329/149‑1 CATTGTTGGCGAATCCGGGTCGGGCAAGTCCACATTGGGCCTGGCGATCTTGCGGCTGATTTCCCGCCGCAGGGGGCGCACGGCTTTCTGGTTCAGCCCTTCGAGGTTCTGCCCATGAAAGCGAATGCCGCCCTGGCTGGAAATCAGCC < 7:178751/149‑1 TTTCCCGCCGCAGGGGGCGCACGGCTTTCTGGTTCAGCCCTTCGAGGTTCTGCCCATGAAAGCGAATGCCGCCCTGGCTGGAAATCAGCCGCAAGATCGCCAGGCCCAATGTGGACTTGCCCGACCCGGATTCGCCAACAATGCCCAGC < 1:148627/149‑1 TCCCGCCGCAGGGGGCGCACGGCTTTCTGGTTCAGCCCTTCGAGGTTCTGCCCATGAAAGCGAATGCCGCCCTGGCTGGAAATCAGCCGCAAGATCGCCAGGCCCAATGTGGACTTGCCCGACCCGGATTCGCCAACAATGCCCAGCGT > 5:292583/1‑149 CCCGCCGCAGGGGGCGCACGGCTTTCTGGTTCAGCCCTTCGAGGTTCTGCCCATGAAAGCGAATGCCGCCCTGGCTGGAAATCAGCCGCAAGATCGCCAGGCCCAATGTGGCCTTGCCCTCCCCGGATTCGCCAACAATGCCCAGCGgc > 8:283710/1‑147 CCGCCGCAGGGGGCGCACGGCTTTCTGGTTCAGCCCTTCGAGGTTCTGCCCATGAAAGCGAATGCCGCCCTGGCTGGAAATCAGCCGCAAGATCGCCAGGCCCAATGTGGACTTGCCCGACCCGGATTCGCCAACAATGCCCAGCGTCT > 7:33057/1‑149 ATCAAGAAGGGCTTTCTGCAGCGCACGGTCGACCATGTGAAGGCGGTGGACGGGGTCAACTTCAGCTTGCCCCAGGGCCAGACGCTGGGCATTGTTGGCGAATCCGGGTCGGGCAAGTCCACATTGGGCCTGGCGATCTTGCGGCTGATTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4689979‑4690131 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atttccCGCCGCAGGGGGCGCACGGCTTTCTGGTTCAGCCCTTCGAGGTTCTGCCCATGAAAGCGAATGCCGCCCTGGCTGGAAATCAGCCGCAAGATCGCCAGGCCCAATGTGGACTTGCCCGACCCGGATTCGCCAACAATGCCCAGCGTCT < NC_002947/4690205‑4690058 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |