| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4850646 = | 53 (0.960) | 4 (0.080) | 4/246 | NT | 7.0% | coding (377/735 nt) | fnrA | DNA‑binding transcriptional dual regulator |
| ? | NC_002947 | 4850683 = | 55 (1.030) | coding (414/735 nt) | fnrA | DNA‑binding transcriptional dual regulator | |||||
GAAGGTGGCAATGCGCTCGTCGGCGGTCTTTTTCGACAGCAGCAGCATCATTTGCTGGTCGTCGCGGATTTCACGGCTCATTACCCGCATCAGCTGGCGGCGTAGCTGTGGCAGTTGCACCGACAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4850773‑4850646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctGATGCGGGTAATGAGCCGTGAAATCCGCGACGACCAGCAAATGATGCTGCTGCTGTCGAAAAAGACCGCCGACGAGCGCATTGCCACCTTCCTGGTCAACCTGTCGGCGCGCTTCCGCGCCCGCGGCTATTCGGCC > NC_002947/4850683‑4850818 GAAGGTGGCAATGCGCTCGTCGGCGGTCTTTTTCGACAGCAGCAGCATCATTTGCTGGTCGTCGCGGATTTCACGGCTCATTACCCGCATCAGCTGGCGGCGTAGCTGTGGCAGTTGCACCGAC < 3:38950/124‑1GAAGGTGGCAATGCGCTCGTCGGCGGTCTTTTTCGACAGCAGCAGCATCATTTGCTGGTCGTCGCGGATTTCACGGCTCATTACCCGCATCAGCTGGCGGCGTAGCTGTGGCAGTTGCACCGAC > 4:38950/1‑124 ATCAGCTGGCGGCGTAGCTGTGGCAGTTGCACCGACAGCTGATGCGGGTAATGAGCCGTGAAATCCGCGACGACCAGCAAATGATGCTGCTGCTGTCGAAAAAGACCGCCGACGAGCGCATTGCCACCTTCCTG > 7:326480/1‑134 ATCAGCTGGCGGCGTAGCTGTGGCAGTTGCACCGACAGCTGATGCGGGTAATGAGCCGTGAAATCCGCGACGACCAGCAAATGATGCTGCTGCTGTCGAAAAAGACCGCCGACGAGCGCATTGCCACCTTCCTG < 8:326480/134‑1 TCAGCTGGCGGCGTAGCTGTGGCAGTTGCACCGACAGCTGATGCGGGTAATGAGCCGTGAAATCCGCGACGACCAGCAAATGATGCTGCTGCTGTCGAAAAAGACCGCCGACGAGCGCATTGCCACCTTCCTGGTCAACCTGTCGGCGC > 8:180524/1‑149 GCACCGACAGCTGATGCGGGTAATGAGCCGTGAAATCCGCGACGACCAGCAAATGATGCTGCTGCTGTCGAAAAAGACCGCCGACGAGCGCATTGCCACCTTCCTGGTCAACCTGTCGGCGCGCTTCCGCGCCCGCGGCTATTCGGCC < 7:180524/148‑1 GAAGGTGGCAATGCGCTCGTCGGCGGTCTTTTTCGACAGCAGCAGCATCATTTGCTGGTCGTCGCGGATTTCACGGCTCATTACCCGCATCAGCTGGCGGCGTAGCTGTGGCAGTTGCACCGACAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4850773‑4850646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctGATGCGGGTAATGAGCCGTGAAATCCGCGACGACCAGCAAATGATGCTGCTGCTGTCGAAAAAGACCGCCGACGAGCGCATTGCCACCTTCCTGGTCAACCTGTCGGCGCGCTTCCGCGCCCGCGGCTATTCGGCC > NC_002947/4850683‑4850818 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |