| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4913179 | 59 (1.070) | 4 (0.080) | 4/244 | NT | 6.2% | coding (1520/1989 nt) | ccmF | holocytochrome c synthetase |
| ? | NC_002947 | = 4913195 | 64 (1.210) | coding (1504/1989 nt) | ccmF | holocytochrome c synthetase | |||||
TGCCCTTGTCAGAGATGAAGTTCGGCCCCTCGAAGTGCTTGGCGCCCTGGAACAGGAAGTGGTAGCCACCCAGCTCCACGCTTTCGCCCGGCGCCATGCGCAGGTCGCGCTCGGCGCTGTTGTTGCTGGACAGCACCACGCCCAGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4913030‑4913179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcacCTGGGCCTGGCGGTGTGTGCGCTGGGCGTGGTGCTGTCCAGCAACAACAGCGCCGAGCGCGACCTGCGCATGGCGCCGGGCGAAAGCGTGGAGCTGGGTGGCTACCACTTCCTGTTCCAGGGCGCCAAGCACTTCGAGGGGCCGAAC < NC_002947/4913195‑4913049 TGCCCTTGTCAGAGATGAAGTTCGGCCCCTCGAAGTGCTTGGCGCCCTGGAACAGGAAGTGGTAGCCACCCAGCTCCACGCTTTCGCCCGGCGCCATGCGCAGGTCGCGCTCGGCGCTGTTGTTGCTGGACAGCACCACGCCCAGCGCA < 6:20816/149‑1TGCCCTTGTCAGAGATGAAGTTCGGCCCCTCGAAGTGCTTGGCGCCCTGGAACAGGAAGTGGTAGCCACCCAGCTCCACGCTTTCGCCCGGCGCCATGCGCAGGTCGCGCTCGGCGCTGTTGTTGCTGGACAGCACCACGCCCAGCGCA < 7:8925/149‑1 TGGTAGCCACCCAGCTCCACGCTTTCGCCCGGCGCCATGCGCAGGTCGCGCTCGGCGCTGTTGTTGCTGGACAGCACCACGCCCAGCGCACCTGGGCCTGGCGGTGTGTGCGCT < 7:77176/114‑1 TGGTAGCCACCCAGCTCCACGCTTTCGCCCGGCGCCATGCGCAGGTCGCGCTCGGCGCTGTTGTTGCTGGACAGCACCACGCCCAGCGCACCTGGGCCTGGCGGTGTGTGCGCT > 8:77176/1‑114 CTCCACGCTTTCGCCCGGCGCCATGCGCAGGTCGCGCTCGGCGCTGTTGTTGCTGGACAGCACCACGCCCAGCGCACCTGGGCCTGGCGGTGTGTGCGCTGGG < 5:54515/103‑1 CTCCACGCTTTCGCCCGGCGCCATGCGCAGGTCGCGCTCGGCGCTGTTGTTGCTGGACAGCACCACGCCCAGCGCACCTGGGCCTGGCGGTGTGTGCGCTGGG > 6:54515/1‑103 GCGCACCTGGGCCTGGCGGTGTGTGCGCTGGGCGTGTTGCTGTCCAGCAACAACAGCGCCGAGCGCGACCTGCGCATGGCGCCGGGCGAAAGCGTGGAGCTGGGTGGCTACCACTTCCTGTTCCAGGGCGCCAAGCACTTCGAGGGGC < 7:176876/148‑1 ACCTGGGCCTGGCGGTGTGTGCGCTGGGCGTGGTGCTGTCCAGCAACAACAGCGCCGAGCGCGACCTGCGCATGGCGCCGGGCGAAAGCGTGGAGCTGGGTGGCTACCACTTCCTGTTCCAGGGCGCCAAGCACTTCGAGGGGCCGAAC > 5:339479/1‑149 TGCCCTTGTCAGAGATGAAGTTCGGCCCCTCGAAGTGCTTGGCGCCCTGGAACAGGAAGTGGTAGCCACCCAGCTCCACGCTTTCGCCCGGCGCCATGCGCAGGTCGCGCTCGGCGCTGTTGTTGCTGGACAGCACCACGCCCAGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4913030‑4913179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcacCTGGGCCTGGCGGTGTGTGCGCTGGGCGTGGTGCTGTCCAGCAACAACAGCGCCGAGCGCGACCTGCGCATGGCGCCGGGCGAAAGCGTGGAGCTGGGTGGCTACCACTTCCTGTTCCAGGGCGCCAAGCACTTCGAGGGGCCGAAC < NC_002947/4913195‑4913049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |