| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4997480 = | 50 (0.900) | 4 (0.080) | 3/242 | NT | 7.9% | coding (621/999 nt) | PP_4405 | sensory box protein |
| ? | NC_002947 | 4997537 = | 46 (0.880) | coding (564/999 nt) | PP_4405 | sensory box protein | |||||
AGTTGTCCTGGGTGAACCAGCAGTTGCAGCGGCAACTGGACGAGAACCGTGAATTGGCCGAACGCGATGCGTTGACCCGTGTCGCCAACCGTTACCGGCTGGAGAGCGCGTTGCAGCTGGAGTGCCAGCGCGCCCAGCGCTTCCGCCAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4997631‑4997480‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagccgGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGCGACTGGTTCTTCTGTTCCAGT > NC_002947/4997537‑4997684 AGTTGTCCTGGGTGAACCAGCAGTTGCAGCGGCAACTGGACGAGAACCGTGAATTGGCCGAACGCGATGCGTTGACCCGTGTCGCCAACCGTTACCGGCTGGAGAGCGCGTTGCAGCTGGAGTGCCAGCGCGCCCAGCGCTTCCGCCA < 7:288694/148‑1 cCAGTTGCCGCTGCAACTGGACGAGAACCGTGAATTGGCCGAACGCGATGCGTTGACCCGTGTCGCCAACCGTTACCGGCTGGAGAGCGCGTTGCAGCTGGAGTGCCAGCGCGCCCAGCGCTTCCGCCAGCCG > 2:18109/2‑133 cCAGTTGCCGCTGCAACTGGACGAGAACCGTGAATTGGCCGAACGCGATGCGTTGACCCGTGTCGCCAACCGTTACCGGCTGGAGAGCGCGTTGCAGCTGGAGTGCCAGCGCGCCCAGCGCTTCCGCCAGCCG < 1:18109/132‑1 GCAACTGGACGAGAACCGTGAATTGGCCGAACGCGATGCGTTGACCCGTGTCGCCAACCGTTACCGGCTGGAGAGCGCGTTGCAGCTGGAGTGCCAGCGCGCCCAGCGCTTCCGC > 1:28102/1‑115 GCAACTGGACGAGAACCGTGAATTGGCCGAACGCGATGCGTTGACCCGTGTCGCCAACCGTTACCGGCTGGAGAGCGCGTTGCAGCTGGAGTGCCAGCGCGCCCAGCGCTTCCGC < 2:28102/115‑1 CGGCTGGAGAGCGCGTTGCAGCTGGAGTGCCAGCGCGCCCAGCGCTTCCGCCAGCCGGTAACGGTTGGCGACACGGGTCAATGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGA < 1:255498/147‑1 CGGCTGGAGAGCGCGTTGCAGCTGGAGTGCCAGCGCGCCCAGCGCTTCCGCCAGCCGGTAACGGTTGGCGACACGGGTCAATGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGA > 2:255498/1‑147 CGGCTGGAGAGCGCGTTGCAGCTGGAGTGCCAGCGCGCCCAGCGCTTCCGCCAGCCGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGAC > 6:311942/1‑148 AGCTGGAGTGCCAGCGCGCCCAGCGCTTCCGCCAGCCGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGC < 5:311942/149‑1 CAGCCGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGCGACTGGTTCTTCT < 5:142069/146‑1 AGCCGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGCGACTGGTTCTTCTGTTC > 2:155327/1‑149 AGCCGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGCGACTGGTTCTTCTGTTC < 3:91034/149‑1 AGCCGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGC < 8:52671/132‑1 AGCCGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGC > 7:52671/1‑132 GCCGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGCGACTGGTTCTTC > 8:125259/1‑143 GCCGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGCGACTGGTTCTTC < 7:125259/143‑1 CCGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGCGACTGGTTCTTCTGTTCCA < 4:166512/149‑1 CCGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGCGACTGGTTCTTCTGTTCCA < 3:19446/149‑1 CGGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGCGACTGGTTCTTCTGTTCCAG < 6:47243/149‑1 GGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGCGACTGGTTCTTCTGTTCCAGT > 1:224236/1‑149 AGTTGTCCTGGGTGAACCAGCAGTTGCAGCGGCAACTGGACGAGAACCGTGAATTGGCCGAACGCGATGCGTTGACCCGTGTCGCCAACCGTTACCGGCTGGAGAGCGCGTTGCAGCTGGAGTGCCAGCGCGCCCAGCGCTTCCGCCAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4997631‑4997480‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagccgGTAACGGTTGGCGACACGGGTCAACGCATCGCGTTCGGCCAATTCACGGTTCTCGTCCAGTTGCCGCTGCAACTGCTGGTTCACCCAGGACAACTCACGGGTGCGTTCGGCCACCTGAAACTCCAGCGACTGGTTCTTCTGTTCCAGT > NC_002947/4997537‑4997684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |