New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5175311 | 63 (1.140) | 6 (0.110) | 6/248 | NT | 9.2% | coding (114/945 nt) | PP_4551 | alpha/beta family hydrolase |
? | NC_002947 | = 5175355 | 57 (1.060) | coding (158/945 nt) | PP_4551 | alpha/beta family hydrolase |
ATACACTGTTCGGGTAACCGCGCGCACAAGGACCCGCCATGCCTCACGACGCCTTCTGGCTGCCCGCCAGTGAGCACTGCAGCCTGTACGTACACCAATGGCTGCCGGCCACACCGGTAAAGGCCGTGGTGCTGCTGGCCCATGGCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5175160‑5175311 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTCGCTCAGAGCCTGGCCCAGGCGCTGGTAGCGCCCGGCATGCTCGGCCATG < NC_002947/5175355‑5175305 ATACACTGTTCGGGTAACCGCGCGCACAAGGACCTGCCATGCCTCACGACGCCTTCTGGCTGCCCGCCAGTGGGCACTGCAGCCTGTACGTACACCAATGGCTGCCGGCCACACCGGTAAAGGCCGTGTTGATCCTGGCCCATGGCATG > 3:247476/1‑149 ACACTGTTCGGGTAACCGCGCGCACAAGGACCCGCCATGCCTCACGACGCCTTCTGGCTGCCCGCCAGTGAGCACTGCAGCCTGTACGTACACCAATGGCTGCCGGCCACACCGGTAAAGGCCGTGGTGCTGCTGGCCCATGGCATGG < 5:108166/148‑1 ACACTGTTCGGGTAACCGCGCGCACAAGGACCCGCCATGCCTCACGACGCCTTCTGGCTGCCCGCCAGTGAGCACTGCAGCCTGTACGTACACCAATGGCTGCCGGCCACACCGGTAAAGGCCGTGGTGCTGCTGGCCCATGGCATGG > 6:108166/1‑148 ACGCCTTCTGGCTGCCCGCCAGTGAGCACTGCAGCCTGTACGTACACCAATGGCTGCCGGCCACACCGGTAAAGGCCGTGGTGCTGCTGGCCCATGGCATGGC‑‑CGAGCA‑TGCCTGGCCCAGGCGCTGGTAGCGCCCGGCATGCTCGG > 5:21503/1‑147 ACGCCTTCTGGCTGCCCGCCAGTGAGCACTGCAGCCTGTACGTACACCAATGGCTGCCGGCCACACCGGTAAAGGCCGTGGTGCTGCTGGCCCATGGCATGGC‑‑CGAGCA‑TGCCTGGCCCAGGCGCTGGTAGCGCCCGGCATGCTCGG < 6:21503/147‑1 CCCGCCAGTGAGCACTGCAGCCTGTACGTACACCAATGGCTGCCGGCCACACCGGTAAAGGCCGTGGTGCTGCTGGCCCATGGCATGGCCTCGCTCAGAGCCTGGCCCAGGCGCTGGTAGCGCCCGGCATGCTCGGC > 3:247616/1‑137 CCCGCCAGTGAGCACTGCAGCCTGTACGTACACCAATGGCTGCCGGCCACACCGGTAAAGGCCGTGGTGCTGCTGGCCCATGGCATGGCCTCGCTCAGAGCCTGGCCCAGGCGCTGGTAGCGCCCGGCATGCTCGGC < 4:247616/137‑1 CACTGCAGCCTGTACGTACACCAATGGCTGCCGGCCACACCGGTAAAGGCCGTGGTGCTGCTGGCCCATGGCATGGCCTCGCTCAGAGCCTGGCCCAGGCGCTGGTAGCGCCCGGCATGCTCGGCCATG > 5:164407/1‑129 CACTGCAGCCTGTACGTACACCAATGGCTGCCGGCCACACCGGTAAAGGCCGTGGTGCTGCTGGCCCATGGCATGGCCTCGCTCAGAGCCTGGCCCAGGCGCTGGTAGCGCCCGGCATGCTCGGCCATG < 6:164407/129‑1 ATACACTGTTCGGGTAACCGCGCGCACAAGGACCCGCCATGCCTCACGACGCCTTCTGGCTGCCCGCCAGTGAGCACTGCAGCCTGTACGTACACCAATGGCTGCCGGCCACACCGGTAAAGGCCGTGGTGCTGCTGGCCCATGGCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5175160‑5175311 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTCGCTCAGAGCCTGGCCCAGGCGCTGGTAGCGCCCGGCATGCTCGGCCATG < NC_002947/5175355‑5175305 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |