New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5273698 =	71 (1.280)	5 (0.100)	5/242	NT	7.4%	coding (845/1125 nt)	rlmG	ribosomal RNA large subunit methyltransferase G
	?	NC_002947	5273737 =	58 (1.110)					coding (884/1125 nt)	rlmG	ribosomal RNA large subunit methyltransferase G

CACCAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5273849‑5273698 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggcTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGGTAACCG  >  NC_002947/5273737‑5273881                                                                                                                                                                                                                                                                                                           CACCAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCG                                                                                                                                                      >  4:323928/1‑149   CCAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGG                                                                                                                                                    <  6:316109/149‑1    CAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGC                                                                                                                                                   <  3:12001/149‑1    CAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGC                                                                                                                                                   <  6:286328/149‑1    CAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGC                                                                                                                                                   <  8:325903/149‑1                                                                                                                CAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGC                                       >  2:169496/1‑149                                                                                                                 AGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGC                                                >  7:171566/1‑139                                                                                                                 AGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGC                                                <  8:171566/139‑1                                                                                                                   CCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGC                                                                  >  1:300528/1‑119                                                                                                                   CCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGC                                                                  <  2:300528/119‑1                                                                                                                                                  GCCGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGGTAA     >  5:247943/1‑149                                                                                                                                                    CGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGG        <  7:276466/144‑1                                                                                                                                                    CGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGG        >  8:276466/1‑144                                                                                                                                                     GGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGGTAACCG  <  5:157246/149‑1                                                                                                                                                                                                                                                                                                           CACCAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5273849‑5273698 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggcTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGGTAACCG  >  NC_002947/5273737‑5273881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.