New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5448944 =	69 (1.250)	3 (0.060)	3/232	NT	5.2%	intergenic (‑45/‑188)	PP_4786/ybeZ	hypothetical protein/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	5449034 =	48 (0.960)					intergenic (‑135/‑98)	PP_4786/ybeZ	hypothetical protein/nucleoside triphosphate hydrolase domain‑containing protein

GAGTTGAACTCAAGAATAACCCTTGAATGGCAGTGGCGAAAGCACTGAAACGTTCAACGGTATGTACAGGCTGTTCTGGCCTCCCCGCGGGTCAACCCGCTCCGGCAAGGGCGGTGGGGATCCTGTGGGCGTGGGTCCACCCGTGAACAGGCCAGAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5449103‑5448944 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccagaacagCCTGTACATACCGTTGAACGTTTCAGTGCTTTCGCCACTGCCATTCAAGGGTTATTCTTGAGTTCAACTCCATCGCCGTCGAGCGGCTAAAAACGACCTTGAACGCACCCATAGAACCCCATCGTTTCATCCTCGAACCCTTCGAGG  >  NC_002947/5449034‑5449180                                                                                                                                                                                                                                                                                                                     GAGTTGAACTCAAGAATAACCCTTGAATGGCAGTGGCGAAAGCACTGAAACGTTCAACGGTATGTACAGGCTGTTCTGGCCTCCCCGCGGGTCAACCCGCTCCGGCAAGGGCGGTGGGGATCCTGTGGGCGTGGGTCCACCCGTGAACA                                                                                                                                                                <  1:164140/149‑1         CTCAAGAATAACCATTGAATGGCAGTGGCGAAAGCACTGAAACGTTCAACGGTATGTACAGGCTGTTCTGGCCTCCCCGCGGGTCAACCCGCTCCGGCAAGGGCGGTGGGGATCCTGTGGGCGTGGGTCCACCCGTGAACAGGCCAGAA                                                                                                                                                        >  3:188750/1‑149            AAGAATAACCCTTGAATGGCAGTGGCGAAAGCACTGAAACGTTCAACGGTATGTACAGGCTGTTCTGGCCTCCCCGCGGGTCAACCCGCTCCGGCAAGGGCGGTGGGGATCCTGTGGGCGTGGGTCCACCCGTGAACAGGCCAGAAC                                                                                                                                                       <  2:80788/147‑1            AAGAATAACCCTTGAATGGCAGTGGCGAAAGCACTGAAACGTTCAACGGTATGTACAGGCTGTTCTGGCCTCCCCGCGGGTCAACCCGCTCCGGCAAGGGCGGTGGGGATCCTGAGGGCGTGGGTCCACCCCTGAACAGGCCAGAACAG                                                                                                                                                     >  8:20740/1‑149              GAATAACCCTTGAATGGCAGTGGCGAAAGCACTGAAACGTTCAACGGTATGTACAGGCTGTTCTGGCCTCCCCGCGGGTCAACCCGCTCCGGCAAGGGCGGTGGGGATCCTGTGGGCGTGGGTCCACCCGTGAACAGGCCAGAAC                                                                                                                                                       >  5:106064/1‑145              GAATAACCCTTGAATGGCAGTGGCGAAAGCACTGAAACGTTCAACGGTATGTACAGGCTGTTCTGGCCTCCCCGCGGGTCAACCCGCTCCGGCAAGGGCGGTGGGGATCCTGTGGGCGTGGGTCCACCCGTGAACAGGCCAGAAC                                                                                                                                                       <  6:106064/145‑1                                                                     GGCTGTTCTGGCCTCCCCGCGGGTCAACCCGCTCCGGCAAGGGCGGTGGGGATCCTGTGGGCGTGGGTCCACCCGTGAACAGGCCAGAACAGCCTGTACATACCGTTGAACGTTTCAGTGCTTTCGCCACTGCCATTCAAGGGTGATTC                                                                                            >  3:226407/1‑149                                                                       CTGTTCTGGCCTCCCCGCGGGTCAACCCGCTCCGGCAAGGGCGGTGGGGATCCTGTGGGCGTGGGTCCACCCGTGAACAGGCCAGAACAGCCTGTACATACCGTTGAACGTTTCAGTGCTTTCGCCACTGCCATTCAAGGGTTATTCTT                                                                                          >  6:147842/1‑149                                                                               GCCTCCCCGCGGGTCAACCCGCTCCGGCAAGGGCGGTGGGGATCCTGTGGGCGTGGGTCCACCCGTGAACAGGCCAGAACAGCCTGTACATACCGTTGAACGTTTCAGTGCTTTCGCCACTGCCATTCAAGGGTTATTCTTGAGTT                                                                                     <  5:147842/146‑1                                                                                                                                                      GGCCAGAACAGCCTGTACATACCGTTGAACGTTTCAGTGCTTTCGCCACTGCCATTCAAGGGTTATTCTTGAGTTCAACTCCATCGCCGTCGAGCGGCTAAAAACGACCTTGAACGCACCCATAGAACCCCATCGTTTCATCCTCGAAC           >  1:136707/1‑149                                                                                                                                                         CAGAACAGCCTGTACATACCGTTGAACGTTTCAGTGCTTTCGCCACTGCCATTCAAGG                                                                                                   >  1:295772/1‑58                                                                                                                                                         CAGAACAGCCTGTACATACCGTTGAACGTTTCAGTGCTTTCGCCACTGCCATTCAAGG                                                                                                   <  2:295772/58‑1                                                                                                                                                               AGCCTGTACATACCGTTGAACGTTTCAGTGCTTTCGCCACTGCCATTCAAGGGTTATTCTTGAGTTCAACTCCATCGCCGTCGAGCGGCTAAAAACGACCTTGAACGCACCCATAGAACCCCATCGTTTCATCCTCGAACCCTTCGAGG  <  2:164140/149‑1                                                                                                                                                                                                                                                                                                                     GAGTTGAACTCAAGAATAACCCTTGAATGGCAGTGGCGAAAGCACTGAAACGTTCAACGGTATGTACAGGCTGTTCTGGCCTCCCCGCGGGTCAACCCGCTCCGGCAAGGGCGGTGGGGATCCTGTGGGCGTGGGTCCACCCGTGAACAGGCCAGAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5449103‑5448944 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccagaacagCCTGTACATACCGTTGAACGTTTCAGTGCTTTCGCCACTGCCATTCAAGGGTTATTCTTGAGTTCAACTCCATCGCCGTCGAGCGGCTAAAAACGACCTTGAACGCACCCATAGAACCCCATCGTTTCATCCTCGAACCCTTCGAGG  >  NC_002947/5449034‑5449180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.