New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5647392	48 (0.870)	6 (0.120)	4/238	NT	10.9%	coding (196/738 nt)	PP_4955	hypothetical protein
	?	NC_002947	= 5647427	53 (1.030)					coding (161/738 nt)	PP_4955	hypothetical protein

AAACGCCTCGCCCTTACGCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5647237‑5647392 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacggcacTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGCGTGCGTTGCTGGGGGTAGGTGAAGGGCGCTACGACGTGCTGATCAATGCCTGGTACAACGACTCGCGCGCCAATATCGGGCAATTCTCCAGCGCCTACCT  <  NC_002947/5647427‑5647280                                                                                                                                                                                                                                                                                                                  AAACGCCTCGCCCTTACGCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCC                                                                                                                                                             >  7:153956/1‑149     GCCTCGCCCTTACGCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGG                                                                                                                                                         <  6:224466/149‑1       CTCGCCCTTACGCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCA                                                                                                                                                       >  6:64840/1‑149                  GCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCACTGGCGCGTGC                                                                                                                                            >  2:309502/1‑149                  GCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCAATGGCGCGTGC                                                                                                                                            >  2:314589/1‑149                                                   CGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTG                                                                                                           <  1:309502/149‑1                                                   CGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTG                                                                                                           <  1:314589/149‑1                                                                                                     ATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGC                                                                                                      >  1:221108/1‑104                                                                                                     ATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGC                                                                                                      <  2:221108/104‑1                                                                                                                                                    CCACGGCACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGCGTGCGTTGCTGGGGGTAGGTGAAGGGCGCTACGACGTGCTGATCAATGCCTGGTACAACGACTCGCGCGCCAATATC                         >  5:213144/1‑134                                                                                                                                                    CCACGGCACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGCGTGCGTTGCTGGGGGTAGGTGAAGGGCGCTACGACGTGCTGATCAATGCCTGGTACAACGACTCGCGCGCCAATATC                         <  6:213144/134‑1                                                                                                                                                          CACTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGCGTGCGTTGCTGGGGGTAGGTGAAGGGCGCTACGACGTGCTGATCAATGCCTGGTACAACGACTCGCGCGCCAATATCGGGCAATTCTCCAGCGCCTAC    <  3:167351/149‑1                                                                                                                                                            CTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGCGTGCGTTGCTGGGGGTAGGTGAAGGGCGCTACGACGTGCTGATCAATGCCTGGTACAACGACTCGCGCGCCAATATCGGGCAATTCTCCAGCGCCTACCT  <  2:214692/149‑1                                                                                                                                                                                                                                                                                                                  AAACGCCTCGCCCTTACGCTGCAGCAGGCGAATACGATTACTCAGGTAGGCGCTGGAGAATTGCCCGATATTGGCGCGCGAGTCGTTGTACCAGGCATTGATCAGCACGTCGTAGCGCCCTTCACCTACCCCCAGCAACGCACGCGCCCACGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5647237‑5647392 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacggcacTGGCGCGTGCCGGCTACGCCAGCGGCTATGAAGAGGTGCCGTGGGCGCGTGCGTTGCTGGGGGTAGGTGAAGGGCGCTACGACGTGCTGATCAATGCCTGGTACAACGACTCGCGCGCCAATATCGGGCAATTCTCCAGCGCCTACCT  <  NC_002947/5647427‑5647280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.