New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5669426	57 (1.030)	5 (0.100)	4/228	NT	8.6%	intergenic (+27/‑98)	ahcY/metF	adenosylhomocysteinase/5,10‑methylenetetrahydrofolate reductase
	?	NC_002947	= 5669447	55 (1.120)					intergenic (+48/‑77)	ahcY/metF	adenosylhomocysteinase/5,10‑methylenetetrahydrofolate reductase

AACTCGACGAAGAAGTGGCCCTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5669266‑5669426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgcaagtggcaACGGCACGGTATGCCTTTGCCTGCCACTTGCAGCTTCAAGCTTG‑CCGCTTAGTAGCGGTAGGCGTGCGGCTTGAACGGGCCTTCGACGGTCACGCCGATGTAGTCGGCTTGCTGCTTGGTCAGCTGGGTGACCACGCCGCCGAAGCC  <  NC_002947/5669447‑5669301                                                                                                                                                                                                                                                                                                                       AACTCGACGAAGAAGTGGCCCTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAG                                                                                                                                                                  <  7:155137/149‑1    TCGACGAAGAAGTGGCCCTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTG                                                                                                                                                               >  3:135243/1‑149          AAGAAGTGGCCCTGGAAATGGTACGCGGCTTCGGCGGCGTGGTCACCCAGCTGAACAAGCAGAAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCCCTACTAAGCGGCAACCTAGAAGCTGCAAGTG                                                                                                                                                         >  4:257282/1‑149                               TCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAACGGCACGGTATGCCTTT                                                                                                                                    <  8:121785/149‑1                               TCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAACGGCACGGTATGCCTTT                                                                                                                                    <  8:126698/149‑1                                              GCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAACGGCACGGTATGCCTTTGCCTGCCACTTGCAG                                                                                                                     <  3:338720/149‑1                                               CGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAACGGCACGGTATGCCTTTGCCTGCCACTTGCAGC                                                                                                                    >  1:136875/1‑149                                                GTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAACGGCACGGTATGCCTTTGCCTGCCACTTGCAGCT                                                                                                                   <  2:136875/149‑1                                                                                                                                                             TGGCAACGGCACGGTATGCCTTTGCCTGCCACTTGCAGCTTCAAGCTTG‑CCGCTTAGTAGCGGTAGGCGTGCGGCTTGAACGGGCCTTCGACGGTCACGCCGATGTAGTCGGCTTGCTGCTTGGTCAGCTGGGTGACCACGCCGCCG       >  1:221386/1‑147                                                                                                                                                               GCAACGGCACGGTATGCCTTTGCCTGCCACTTGCAGCTTCAAGCTTG‑CCGCTTAGTAGCGGTAGGCGTGCGGCTTGAACGGGCCTTCGACGGTCACGCCGATGTAGTCGGCTTGCTGCTTGGTCAGCTGGGTGACCACGCCGCCGAAGC   >  7:333590/1‑149                                                                                                                                                                CAACGGCACGGTATGCCTTTGCCTGCCACTTGCAGCTTCAAGCTTG‑CCGCTTAGTAGCGGTAGGCGTGCGGCTTGAACGGGCCTTCGACGGTCACGCCGATGTAGTCGGCTTGCTGCTTGGTCAGCTGGGTGACCACGCCGCCGAAGCC  >  2:281846/1‑149                                                                                                                                                                CAACGGCACGGTATGCCTTTGCCTGCCACTTGCAGCTTCAAGCTTG‑CCGCTTAGTAGCGGTAGGCGTGCGGCTTGAACGGGCCTTCGACGGTCACGCCGATGTAGTCGGCTTGCTGCTTGGTCAGCTGGGTGACCACGCCGCCGAAGCC  <  3:12665/149‑1                                                                                                                                                                CAACGGCACGGTATGCCTTTGCCTGCCACTTGCAGCTTCAAGCTTG‑CCGCTTAGTAGCGGTAGGCGTGCGGCTTGAACGGGCCTTCGACGGTCACGCCGATGTAGTCGGCTTGCTGCTTGGTCAGCTGGGTGACCACGCCGCCGAAGCC  <  3:17439/149‑1                                                                                                                                                                 AACGGCACGGTATGCCTTTGCCTGCCACTTGCAGCTTCAAGCTTGCCCCCTTAGTAGCGGTAGGCGTGCGGCTTGAACGGGCCTTCGACAGTCACGCCGATGAAGTCGGCTTGCTGCTTGGTCAGCTGGGTGACCACGCCGCCGAAGCC  >  1:84597/1‑149                                                                                                                                                                 AACGGCACGGTATGCCTTTGCCTGCCACTTGCAGCTTCAAGCTTG‑CCGCTTAGTAGCGGTAGGCGTGCGGCTTGAACGGGCCTTCGACGGTCACGCCGATG                                                 <  3:281282/101‑1                                                                                                                                                                 AACGGCACGGTATGCCTTTGCCTGCCACTTGCAGCTTCAAGCTTG‑CCGCTTAGTAGCGGTAGGCGTGCGGCTTGAACGGGCCTTCGACGGTCACGCCGATG                                                 >  4:281282/1‑101                                                                                                                                                                                                                                                                                                                       AACTCGACGAAGAAGTGGCCCTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5669266‑5669426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgcaagtggcaACGGCACGGTATGCCTTTGCCTGCCACTTGCAGCTTCAAGCTTG‑CCGCTTAGTAGCGGTAGGCGTGCGGCTTGAACGGGCCTTCGACGGTCACGCCGATGTAGTCGGCTTGCTGCTTGGTCAGCTGGGTGACCACGCCGCCGAAGCC  <  NC_002947/5669447‑5669301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.