New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5691327 | 78 (1.410) | 7 (0.130) | 6/248 | NT | 8.3% | coding (747/954 nt) | gshB | glutathione synthetase |
? | NC_002947 | = 5691353 | 79 (1.470) | coding (773/954 nt) | gshB | glutathione synthetase |
TCAAGGACGGCGACAAGCGCATCCTGATGATCGATGGCGAGCCAGTGGACTATTGCCTGGCACGCATTCCGGCCAGCGGCGAAACCCGTGGCAACCTGGCCGCAGGCGGGCGTGGCGAAGCCCGCCCACTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5691194‑5691327 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccTGAGCGGCGATCCAGCGGTCGCGCTCGGTCAGTGGGCGGGCTTCGCCACGCCCGCCTGCGGCCAGGTTGCCACGGGTTTCGCCGCTGGCCGGAATGCGTGCCAGGCAATAGTCCACTGGCTCGCCATCGATCATCAGGATGCGCTTG < NC_002947/5691353‑5691207 TCAAGGACGGCGACAAGCGCATCCTGATGATCGATGGCGAGCCAGTGGACTATTGCCTGGCACGCATTCCGGCCAGCGGCGAAACCCGTGGCAACCTGGCCGCAGGCGGGCGTGGCGAAGCCCGCCCACTGACCTGAGCGGCGATCCAG > 8:86389/1‑149 CGCATCCTGATGATCGATGGCGAGCCAGTGGACTATTGCCTGGCACGCATTCCGGCCAGCGGCGAAACCCGTGGCAACCTGGCCGCAGGCGGGCGTGGCGAAGCCCGCCCACTGACCTGAGCGGCGATCCAGCGGTCGCGCTCGGTCAG < 5:169535/149‑1 ATGATCGATGGCGAGCCAGTGGACTATTGCCTGGCACGCATTCCGGCCAGCGGCGAAACCCGTGGCAACCTGGCCGCAGGCGGGCGTGGCGAAGCCCGCCCACTGACCTGAGCGGCGATCCAGCGGTCGCGCTCGGTCAGTGGGCGG < 7:86389/147‑1 CTGGCACGCATTCCGGCCAGCGGCGAAACCCGTGGCAACCTGGCCGCAGGCGGGCGTGGCGAAGCCCGCCCACTGACCTGAGCGGCGATCCAGCGGTCGCGCTCGGTCA > 7:300619/1‑109 CTGGCACGCATTCCGGCCAGCGGCGAAACCCGTGGCAACCTGGCCGCAGGCGGGCGTGGCGAAGCCCGCCCACTGACCTGAGCGGCGATCCAGCGGTCGCGCTCGGTCA < 8:300619/109‑1 TGGCACGCATTCCGGCCAGCGGCGAAACCCGTGGCAACCTGGCCGCAGGCGGGCGTGGCGAAGCCCGCCCACTGACCTGAGCGGCGATCCAGCGGTCGCGCTCGGTCA > 1:245837/1‑108 TGGCACGCATTCCGGCCAGCGGCGAAACCCGTGGCAACCTGGCCGCAGGCGGGCGTGGCGAAGCCCGCCCACTGACCTGAGCGGCGATCCAGCGGTCGCGCTCGGTCA < 2:245837/108‑1 ACCTGAGCGGCGATCCAGCGGTCGCGCTCGGTCAGTGGGCGGGCTTCGCCACGCCCGCCTGCGGCCAGGTTGCCACGGGTTTCGCCGCTGGCCGGAATGCGTGCCAGGCAATAGTCCACTGGCTCGCCATCGATCATCAGGATGCGCTT < 2:289924/149‑1 ACCTGAGCGGCGATCCAGCGGTCGCGCTCGGTCAGTGGGCGGGCTTCGCCACGCCCGCCTGCGGCCAGGTTGCCACGGGTTTCGCCGCTGGCCGGAATGCGTGCCAGGCAATAGTCCACTGGCTCGCCATCGATCATCAGGATGCGCTT > 8:327298/1‑149 ACCTGAGCGGCGATCCAGCGGTCGCGCTCGGTCAGTGGGCGGGCTTCGCCACGCCCGCCTGCGGCCAGGTTGCCACGGGTTTCGCCGCTGGCCGGAATGCGTGCCAGGCAATAGTCCACTGGCTCGCCATCGATCAT > 1:247638/1‑137 ACCTGAGCGGCGATCCAGCGGTCGCGCTCGGTCAGTGGGCGGGCTTCGCCACGCCCGCCTGCGGCCAGGTTGCCACGGGTTTCGCCGCTGGCCGGAATGCGTGCCAGGCAATAGTCCACTGGCTCGCCATCGATCAT < 2:247638/137‑1 CCTGAGCGGCGATCCAGCGGTCGCGCTCGGTCAGTGGGCGGGCTTCGCCACGCCCGCCTGCGGCCAGGTTGCCACGGGTTTCGCCGCTGGCCGGAATGCGTGCCAGGCAATAGTCCACTGGCTCGCCATCGATCATCAGGATGCGCTTG > 4:238090/1‑149 CTGAGCGGCGATCCAGCGGTCGCGCTCGGTCAGTGGGCGGGCTTCGCCACGCCCGCCTGCGGCCAGGTTGCCACGGGTTTCGCCGCTGGCCGGAATGCGTGCCAGGCAATAGTCCACTGGCTCGCCATCGA < 5:142268/131‑1 CTGAGCGGCGATCCAGCGGTCGCGCTCGGTCAGTGGGCGGGCTTCGCCACGCCCGCCTGCGGCCAGGTTGCCACGGGTTTCGCCGCTGGCCGGAATGCGTGCCAGGCAATAGTCCACTGGCTCGCCATCGA > 6:142268/1‑131 TCAAGGACGGCGACAAGCGCATCCTGATGATCGATGGCGAGCCAGTGGACTATTGCCTGGCACGCATTCCGGCCAGCGGCGAAACCCGTGGCAACCTGGCCGCAGGCGGGCGTGGCGAAGCCCGCCCACTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5691194‑5691327 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccTGAGCGGCGATCCAGCGGTCGCGCTCGGTCAGTGGGCGGGCTTCGCCACGCCCGCCTGCGGCCAGGTTGCCACGGGTTTCGCCGCTGGCCGGAATGCGTGCCAGGCAATAGTCCACTGGCTCGCCATCGATCATCAGGATGCGCTTG < NC_002947/5691353‑5691207 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |