New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5992984 =	54 (0.980)	4 (0.070)	4/248	NT	5.9%	coding (975/1263 nt)	opdB	proline‑specific outer membrane porin D
	?	NC_002947	5993073 =	76 (1.420)					coding (1064/1263 nt)	opdB	proline‑specific outer membrane porin D

GTATTTCAGGTCGATGTCGCGTTCCCAGTGCTTGCCGCCGTCGCCGTACTGGTTCACATAGGCGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5993134‑5992984 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCCTATGTGAACCAGTACGGCGACGGCGGCAAGCACTGGGAACGCGACATCGACCTGAAATACGTGGTGCAGTCGGGGGCAGCCAAGGACCTGAGCCTGTCGTTCTCCCACGTCAGCCACCGCGCCAACCAGGCCCAGGCGGGCGATG  >  NC_002947/5993073‑5993219                                                                                                                                                                                                                                                                                                            GTATTTCAGGTCGATGTCGCGTTCCCAGTGCTTGCCGCCGTCGCCGTACTGGTTCACATAGGCGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTGG                                                                                                                                                       >  8:270883/1‑149  TATTTCAGGTCGATGTCGCGTTCCCAGTGCTTGCCGCCGTCGCCGTACTGGTTCACATAGGCGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTGGC                                                                                                                                                      <  7:18458/149‑1   ATTTCAGGTCGATGTCGCGTTCCCAGTGCTTGCCGCCGTCGCCGTACTGGTTCACATAGGCGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTGGC                                                                                                                                                      >  3:103852/1‑148                   GCGTTCCCAGTGCTTGCCGCCGTCGCCGTACTGGTTCACATAGGCGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTG                                                                                                                                                        >  3:143485/1‑130                   GCGTTCCCAGTGCTTGCCGCCGTCGCCGTACTGGTTCACATAGGCGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTG                                                                                                                                                        >  3:161899/1‑130                   GCGTTCCCAGTGCTTGCCGCCGTCGCCGTACTGGTTCACATAGGCGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTG                                                                                                                                                        <  4:143485/130‑1                   GCGTTCCCAGTGCTTGCCGCCGTCGCCGTACTGGTTCACATAGGCGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTG                                                                                                                                                        <  4:161899/130‑1                                                              GCGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTGGCGCCTATGTGAACCAGTACGGCGACGGCGGCAAGCACTGGGAACGCG                                                                                                        <  7:7914/135‑1                                                              GCGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTGGCGCCTATGTGAACCAGTACGGCGACGGCGGCAAGCACTGGGAACGCG                                                                                                        >  8:7914/1‑135                                                               CGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTGGCGCCTATGTGAACCAGTACGGCGACGGCGGCAAGCACTGGGAACGCGACATCGACCTGAAA                                                                                          >  4:18955/1‑148                                                                       GCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTGGCGCCTATGTGAACCAGTACGGCGACGGCGGCAAGCACTGGGAACGCGACATCGACCTGAAATACGTGGTG                                                                                 <  3:18955/149‑1                                                                                                                                                    GGCGCCTATGTGAACCAGTACGGCGACGGCGGCAAGCACTGGGAACGCGACATCGACCTGAAATACGTGGTGCAGTCGGGGGCAGCCAAGGACCTGAGCCTGTCGTTCTCCCACGTCAGCCACCGCGCCAACCAGGCCCAGGCGGGCGA    <  7:132716/149‑1                                                                                                                                                     GCGCCTATGTGAACCAGTACGGCGACGGCGGCAAGCACTGGGAACGCGACATCGACCTGAAATACGTGGTGCAGTCGGGGGCAGCCAAGGACCTGAGCCTGTCGTTCTCCCACGTCAGCCACCGCGCCAACCAGGCCCAGGCGGGCGAT   <  1:137182/149‑1                                                                                                                                                      CGCCTATGTGAACCAGTACGGCGACGGCGGCAAGCACTGGGAACGCGACATCGACCTGAAATACGTGGTGCAGTCGGGGGCAGCCAAGGACCTGAGCCTGTCGTTCTCCCACGTCAGCCACCGCGCCAACCAGGCCCAGGCGGGCGATG  <  7:4366/149‑1                                                                                                                                                                                                                                                                                                            GTATTTCAGGTCGATGTCGCGTTCCCAGTGCTTGCCGCCGTCGCCGTACTGGTTCACATAGGCGCCGCCCGCAGGCGCATGGCTGCCGTCGATGCCGCGGCCGCTGACATAGCGGCCCATCAGGCTCAGGCCAGGTGCACCGAGGGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5993134‑5992984 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCCTATGTGAACCAGTACGGCGACGGCGGCAAGCACTGGGAACGCGACATCGACCTGAAATACGTGGTGCAGTCGGGGGCAGCCAAGGACCTGAGCCTGTCGTTCTCCCACGTCAGCCACCGCGCCAACCAGGCCCAGGCGGGCGATG  >  NC_002947/5993073‑5993219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.