| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6058144 = | 59 (1.070) | 4 (0.080) | 3/242 | NT | 6.5% | coding (1341/2079 nt) | recG | junction‑specific ATP‑dependent DNA helicase |
| ? | NC_002947 | 6058224 = | 60 (1.150) | coding (1421/2079 nt) | recG | junction‑specific ATP‑dependent DNA helicase | |||||
CTTCGGACTCTTCGATCAGCGTGCATACCCAATAGGCCTGGCGCCCCTCGGCGCAGGCGGCGCGTACCCGCTCGACCACTTCGAAGCGGCGGCTGTCGGCCACCAGCACGGTGTTCACCGGCGTACGCCCTGGCGGCAATTCGTCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6058292‑6058144‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgagcGGGTACGCGCCGCCTGCGCCGAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCGAAGAACTCACCTGCCAGGCCGCCGAAAGCACCTATGAGGAGCTTGGCAGTGCGCTGGGTGAACTGAAGGTGGGGTTGA > NC_002947/6058224‑6058367 CTTCGGACTCTTCGATCAGCGTGCATACCCAATAGGCCTGGCGCCCCTCGGCGCAGGCGGCGCGTACCCGCTCGACCACTTCGAAGCGGCGGCTGTCGGCCACCAGCACGGTGTTCACCGGCGTACGCCCTGGCGGCAATTCGTCGAG > 5:311104/1‑148CTTCGGACTCTTCGATCAGCGTGCATACCCAATAGGCCTGGCGCCCCTCGGCGCAGGCGGCGCGTACCCGCTCGACCACTTCGAAGCGGCGGCTGTCGGCCACCAGCACGGTGTTCACCGGCGTACGCCCTGGCGGCAATTCGTCGAG > 6:352034/1‑148 CCGCTCGACCACTTCGAAGCGGCGGCTGTCGGCCACCAGCACGGTGTTCACCGGCGTACGCCCTGGCGGCAATTCGTCGAGCGGGTACGCGCCGCCTGCGCCGAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCG > 5:107791/1‑148 CCGCTCGACCACTTCGAAGCGGCGGCTGTCGGCCACCAGCAC‑GTGTTCACCGGCGTACGCCCTGGCGGCAATTCGTCGAGCGGGTACGCGCCGCCTGCGCCGAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCG > 1:120999/1‑147 CTCGACCACTTCGAAGCGGCGGCTGTCGGCCACCAGCAC‑GTGTTCACCGGCGTACGCCCTGGCGGCAATTCGTCGAGCGGGTACGCGCCGCCTGCGCCGAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCGAAGAA < 2:120999/149‑1 TCGGCCACCAGCACGGTGTTCACCGGCGTACGCCCTGGCGGCAATTCGTCGAGCGGGTACGCGCCGCCTGCGCCGAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCGAAGAACTCACCTGCCAGGCCGCCGAAA < 6:107791/147‑1 GTCGAGCGGGTACGCGCCGCCTGCGCCGAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCGAAGAACTCACCTGCCAGGCCGCCGAAAGCACCTATGAGGAGCTTGGCAGTGCGCTGGGTGAACTGAAGGTGGGGTT > 2:278341/1‑149 GTCGAGCGGGTACGCGCCGCCTGCGCCGAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCGAAGAACTCACCTGCCAGGCCGCCGAAAGCACCTATGAGGAGCTTGGCAGTGCGCTGGGTGAACTGAAGGTGGGGTT > 5:185912/1‑149 GTCGAGCGGGTACGCGCCGCCTGCGCCGAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCGAAGAACTCACCTGCCAGGCCGCCGAAAGCACCTATGAGGAGCTTGGCAGTGCGCTGG < 3:312302/130‑1 GTCGAGCGGGTACGCGCCGCCTGCGCCGAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCGAAGAACTCACCTGCCAGGCCGCCGAAAGCACCTATGAGGAGCTTGGCAGTGCGCTGG > 4:312302/1‑130 GAGCGGGTACGCGCCGCCTGCGCCGAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCGAAGAACTCACCTGCCAGGCCGCCGAAAGCACCTATGAGGAGCTTGGCAGTGCGCTGGGTGAACTGAAGGTGGGGTTGA < 1:278341/148‑1 CTTCGGACTCTTCGATCAGCGTGCATACCCAATAGGCCTGGCGCCCCTCGGCGCAGGCGGCGCGTACCCGCTCGACCACTTCGAAGCGGCGGCTGTCGGCCACCAGCACGGTGTTCACCGGCGTACGCCCTGGCGGCAATTCGTCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6058292‑6058144‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgagcGGGTACGCGCCGCCTGCGCCGAGGGGCGCCAGGCCTATTGGGTATGCACGCTGATCGAAGAGTCCGAAGAACTCACCTGCCAGGCCGCCGAAAGCACCTATGAGGAGCTTGGCAGTGCGCTGGGTGAACTGAAGGTGGGGTTGA > NC_002947/6058224‑6058367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |