New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1380487 = | 49 (0.880) | 4 (0.080) +CTGAC |
3/246 | NT | 6.9% | intergenic (‑213/+49) | PP_1202/PP_t67 | phospholipids modification protein/tRNA‑Met |
? | NC_002947 | 1380742 = | 64 (1.160) | intergenic (‑130/+5) | PP_t67/PP_t66 | tRNA‑Met/tRNA‑Met |
AACGTATCCAATGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAG > NC_002947/1380340‑1380633 | aaCGTATCCAATGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGcaa < 3:120844/149‑1 (MQ=255) cTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCcgcctgtg > 7:291707/1‑143 (MQ=255) cGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCACGCGCTGCttt > 6:182806/1‑148 (MQ=255) tCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTaca > 2:336991/1‑147 (MQ=255) aGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAgg > 2:332675/1‑149 (MQ=255) acaaaccacacactgtagaatccgccccactgacgcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCTGCTTTTACACAGGc < 4:220818‑M1/29‑1 (MQ=255) gTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCggg > 4:18446/1‑149 (MQ=255) cacacactgtagaatccgccccactgacgcgggatggagcagcctggtagctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCTGCTTTTACACAGGCGGGGtt > 3:220818‑M1/115‑149 (MQ=255) gCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGttt > 4:246337/1‑149 (MQ=255) ctgCGGCTTGCAAGGGTAAATGATCGTTCATCCGGGGCACGCAATTGCATGCCTCCGGGTT‑GCCTGCCGGGCGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGt < 4:105758/147‑1 (MQ=255) aGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGt > 6:149664/1‑149 (MQ=255) aGCGGCTTGGCAGGGTTAAAGATAGTTCATACTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGACGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGt > 4:146863/1‑149 (MQ=255) gCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGtt < 1:336991/149‑1 (MQ=255) cTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGa < 3:183564/149‑1 (MQ=255) gCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTac < 4:162875/125‑1 (MQ=255) gCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTac > 3:162875/1‑125 (MQ=255) aaaGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTg > 8:135900/1‑149 (MQ=255) aaGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGc > 6:156718/1‑149 (MQ=255) aaGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGc > 3:220450/1‑149 (MQ=255) aGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCg < 1:332675/149‑1 (MQ=255) gATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTc > 7:186356/1‑131 (MQ=255) gATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGGTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTc < 8:186356/131‑1 (MQ=255) tAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGa < 5:149664/149‑1 (MQ=255) gTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAAcc > 2:45479/1‑95 (MQ=255) gTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAAcc < 1:45479/95‑1 (MQ=255) tCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTc > 8:265733/1‑122 (MQ=255) tCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTc < 7:265733/122‑1 (MQ=255) cTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGAttt < 5:182806/149‑1 (MQ=255) aCGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAAcc > 3:197663/1‑148 (MQ=255) gaaaTCTCAAGCCTGGGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCTGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACAGAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACcgac < 4:277887/146‑1 (MQ=255) gACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACcgac < 5:156718/149‑1 (MQ=255) gctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTg > 1:357830‑M1/66‑102 (MQ=255) gctcgtcgggctcataacccgaaggtcgtcggttcaaatccggctcccgcaaccatattcgtcagAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTg < 2:357830‑M1/37‑1 (MQ=255) gggTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt > 6:197778/1‑147 (MQ=255) gTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGTATTTGAACCGACGACCTTCGGGTTATGAGc < 3:146863/149‑1 (MQ=255) aTGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgac > 6:144845/1‑148 (MQ=255) ggagggaAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTAc < 5:197778/149‑1 (MQ=255) gagggaAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGtt < 4:158303/76‑1 (MQ=255) gagggaAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGtt < 4:152895/76‑1 (MQ=255) gagggaAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGtt > 3:152895/1‑76 (MQ=255) gagggaAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGtt > 3:158303/1‑76 (MQ=255) agggaAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGtt < 7:316177/129‑1 (MQ=255) agggaAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGtt > 8:316177/1‑129 (MQ=255) gaAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGgc > 5:163137/1‑149 (MQ=255) aaaTCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGgctg < 4:197663/149‑1 (MQ=255) aGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCAt > 2:97379/1‑149 (MQ=255) acgaAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCcgc < 4:220450/149‑1 (MQ=255) acgaAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCcgc > 8:216043/1‑149 (MQ=255) tCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcga > 4:264225/1‑116 (MQ=255) tCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcga < 3:264225/116‑1 (MQ=255) tCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTg < 7:135900/149‑1 (MQ=255) aGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTggg < 1:221383/149‑1 (MQ=255) gTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGAt > 5:202647/1‑149 (MQ=255) ataAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTc > 1:104854/1‑149 (MQ=255) aaaGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCt > 5:46340/1‑148 (MQ=255) aaaGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCAGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTa > 1:265404/1‑149 (MQ=255) aGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACa < 3:246337/149‑1 (MQ=255) gCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAg > 6:294239/1‑149 (MQ=255) | AACGTATCCAATGTTACTCCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGCGCTGCTTTTACACAGGCGGGGTTTGTTCTGACGAATATGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAG > NC_002947/1380340‑1380633 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |