New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1541197 = | 48 (0.870) | 4 (0.080) | 4/246 | NT | 7.2% | coding (328/918 nt) | panE | 2‑dehydropantoate 2‑reductase |
? | NC_002947 | 1541248 = | 57 (1.070) | coding (277/918 nt) | panE | 2‑dehydropantoate 2‑reductase |
GGGGATCATGGGGTTACGTGGGTCGCCCAGCCAGTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGG > NC_002947/1541051‑1541344 | ggggATCATGGGGTTACGTGGGTCGCCCAGCCAGTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGc < 2:115532/149‑1 (MQ=255) ggtggcctgaccctggtcgagcaggaccaaacccggcgctacgccataccggccgaaacggcacaagcgcaaggcccgatccaccggctgctggtggcctgcaaggcctatgacgctgccccggcgattgccggtgtagcgccacGGCt > 8:256555‑M1/146‑149 (MQ=255) ggtggcctgaccctggtcgagcaggaccaaacccggcgctacgccataccggccgaaacggcacaagcgcaaggcccgatccaccggctgctggtggcctgcaaggcctatgacgctgccccggcgattgccggtgtagcgccacGGCt > 1:343745‑M1/146‑149 (MQ=255) cATGGGGTTACGTGGGTCGCCCAGCCAGTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGcc > 3:309973/1‑147 (MQ=255) aTGGGGTTACGTGGGTCGCCCAGCCAGTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAg < 5:314633/149‑1 (MQ=255) ggTTACGTGGGTCGCCCAGCCAGTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGTTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCa > 5:66218/1‑149 (MQ=255) tttcGTGGGGCGCTCAGCCAGTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCAtt < 2:29999/146‑1 (MQ=255) ttACGTGGGTCGCCCAGCCAGTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCAtt < 4:187085/149‑1 (MQ=255) aCGTGGGTCGCCCAGCCAGTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTc < 3:176380/148‑1 (MQ=255) cGTGGGTCGCCCAGCCAGTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGTGACCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCt < 1:106978/149‑1 (MQ=255) ggaccaaacccggcgctacgccataccggccgaaacggcacaagcgcaaggcccgatccaccggctgctggtggcctgcaaggcctatgacgctgccccggcgattgccggtgtagcgccacGGCt > 4:23513‑M1/123‑126 (MQ=255) ggaccaaacccggcgctacgccataccggccgaaacggcacaagcgcaaggcccgatccaccggctgctggtggcctgcaaggcctatgacgctgccccggcgattgccgctgtagcgccacGGCt < 3:23513‑M1/4‑1 (MQ=255) cagccagTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGCTGCAGCGCGCGGGCGGCCCCAGGTCGGCGCCTTCAGCCGGGCTg > 8:253674/1‑124 (MQ=255) caaacccggcgctacgccataccggccgaaacggcacaagcgcaaggcccgatccaccggctgctggtggcctgcaaggcctatgacgctgccccggcgattgccggtgtagcgccacGGCTGCCCAGGCCATTCTGCAACAGCAGCAc < 4:341904‑M1/31‑1 (MQ=255) ccagTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACtt > 8:246136/1‑149 (MQ=255) gTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCgg > 5:177608/1‑149 (MQ=255) ccGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAg > 3:100173/1‑149 (MQ=255) cGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGc > 1:68590/1‑149 (MQ=255) ccggccgaaacggcacaagcgcaaggcccgatccaccggctgctggtggcctgcaaggcctatgacgctgccccggcgattgccggtgtagcgccacGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCg > 3:341904‑M1/98‑149 (MQ=255) aaaaCGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGTTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTg < 6:66218/149‑1 (MQ=255) aCGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGgcg > 1:156750/1‑149 (MQ=255) cACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTa < 2:156750/149‑1 (MQ=255) gCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCg > 1:96757/1‑149 (MQ=255) ccAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCgg < 2:96757/149‑1 (MQ=255) ccAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCg < 4:100173/148‑1 (MQ=255) aGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGc > 4:235567/1‑148 (MQ=255) ccTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGcc > 1:265214/1‑149 (MQ=255) ccTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGcc > 7:117561/1‑149 (MQ=255) ccTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCAAGGCCATTCTGAAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTCGCGCTACAACTGCAATCGcc > 5:343746/1‑149 (MQ=255) cTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCg > 3:40425/1‑149 (MQ=255) tCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCgg > 3:128962/1‑149 (MQ=255) gcgGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCggg < 2:153558/148‑1 (MQ=255) gcgGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCgg < 6:177608/147‑1 (MQ=255) cccgatccaccggctgctggtggcctgcaaggcctatgacgctgccccggcgattgccggtgtagcgccacGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGt > 6:240147‑M1/72‑124 (MQ=255) cccgatccaccggctgctggtggcctgcaaggcctatgacgctgccccggcgattgccggtgtagcgccacGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGt < 5:240147‑M1/53‑1 (MQ=255) aGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCg < 8:117561/149‑1 (MQ=255) ccTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATa < 5:188294/149‑1 (MQ=255) ttCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAgg > 1:334373/1‑149 (MQ=255) tCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGc > 6:89621/1‑149 (MQ=255) g‑gCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGcca > 1:242232/1‑149 (MQ=255) gCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGGGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGccac < 4:309973/149‑1 (MQ=255) gAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGccacca < 7:246136/149‑1 (MQ=255) gATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACcag > 3:44961/1‑147 (MQ=255) gCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGcc > 5:286801/1‑149 (MQ=255) agcgagcgTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGgcgc > 3:293343/1‑94 (MQ=255) agcgagcgTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGgcgc < 4:293343/94‑1 (MQ=255) cgagcgTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTg < 2:68590/149‑1 (MQ=255) aGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCggg < 3:16788/148‑1 (MQ=255) cagcAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCtt < 6:343746/146‑1 (MQ=255) cACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCtt < 5:89621/149‑1 (MQ=255) cACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCtt > 3:216574/1‑149 (MQ=255) aCCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTg > 8:15386/1‑149 (MQ=255) aGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTgcgc < 4:44961/149‑1 (MQ=255) aGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCAGGCCTTgcgc < 2:242232/149‑1 (MQ=255) gCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGc < 3:235567/149‑1 (MQ=255) ttCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGttt > 5:115635/1‑149 (MQ=255) ttCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGttt > 5:302348/1‑149 (MQ=255) tCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTc > 5:135484/1‑149 (MQ=255) tGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCgg > 4:239707/1‑149 (MQ=255) tGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGCCCAGCCATGGCCCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGCTCGGCCCTTGCGCTTGTGCCCTATCGGCCgg > 6:206912/1‑149 (MQ=255) | GGGGATCATGGGGTTACGTGGGTCGCCCAGCCAGTTGAAGCCATGGCCGGCAAAACGCACCTGCCAGTCCCCCTCGCGGAAGGCGCCTTCGGTGCTGGAG‑GCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGG > NC_002947/1541051‑1541344 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |