New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1784165 =	36 (0.650)	4 (0.080)	4/246	NT	9.1%	coding (736/783 nt)	map	methionine aminopeptidase
	?	NC_002947	1784216 =	45 (0.850)					coding (685/783 nt)	map	methionine aminopeptidase

GGGCCAGTTCCGCCTGGAACTGGCCACGGTCGAACAGCTCGGGGTCCACCTGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATGGTGAAGGTCATG  >  NC_002947/1784019‑1784310                                                                                                                                                   |                                                                                                                                                   gggCCAGTTCCGCCTGGAACTGGCCACGGTCGAACAGCTCGGGGTCCACCTGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGAtct                                                                                                                                                  >  3:8602/1‑149 (MQ=255) gggCCAGTTCCGCCTGGAACTGGCCACGGTCGAACAGCTCGGGGTCCACCTGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGAtc                                                                                                                                                   <  1:144129/148‑1 (MQ=255) gcagatcctccactatggccgcgctggcactggcatggagctgaaggaaggcatgaccttcaccatcgagccgatgatcaaccagggcaaggccgacaccaaggtgctgggcgacggctggaccgccatcaccaaggaccgcaagctct                                                                                                                                                  <  5:313961‑M1/3‑1 (MQ=255) gcagatcctccactatggccgcgctggcacgggcatggagctgaaggaaggcatgaccttcaccatcgagccgatgatcaaccagggcaaggccgacaccaaggtgctgggcgacggctggaccgccatcaccaaggaccgcaagctct                                                                                                                                                  <  2:129291‑M1/3‑1 (MQ=255)  ggCCAGTTCCGCCTGGAACTGGCCACGGTCGAACAGCTCGGGGTCCACCTGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGAtctc                                                                                                                                                 <  4:12731/149‑1 (MQ=255)          ccGCCTGGAACTGGCCACGGTCGACCAGCTCGGGGTCCCCCTGGGGCCTCGCGTCACGGTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGAGGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAg                                                                                                                                         >  2:89859/1‑149 (MQ=255)                       gCCACGGTCGAACAGCTCGGGGTCCACCTGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTcaccac                                                                                                                           >  6:59167/1‑149 (MQ=255)                                gAACAGCTCGGGGTCCACCTGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAgtgt                                                                                                                   <  1:52590/148‑1 (MQ=255)                                gAACAGCTCGGGGTCCACCTGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAgtgt                                                                                                                   <  5:156394/148‑1 (MQ=255)                                            gTCCACCTGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGc                                                                                                      >  3:133323/1‑149 (MQ=255)                                              ggaaggcatgaccttcaccatcgagccgatgatcaaccagggcaaggccgacaccaaggtgctgggcgacggctggaccgccatcaccaaggaccgcaagcTCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGcc                                                                                                     <  5:367178‑M1/47‑1 (MQ=255)                                               cACCTGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCga                                                                                                   <  7:42505/149‑1 (MQ=255)                                               cACCTGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCga                                                                                                   <  4:8602/149‑1 (MQ=255)                                                   tGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTgg                                                                                                                                      >  7:140790/1‑111 (MQ=255)                                                   tGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTgg                                                                                                                                      <  8:140790/111‑1 (MQ=255)                                                      tgaccttcaccatcgagccgatgatcaaccagggcaaggccgacaccaaggtgctgggcgacggctggaccgccatcaccaaggaccgcaagcTCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTg                                                                                            >  6:367178‑M1/94‑149 (MQ=255)                                                       gCATCGCGTCACGTGCCTGTCGTGGGGTGGCCTGGCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGc                                                                                           <  4:281770/149‑1 (MQ=255)                                                        cATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCg                                                                                          >  2:248087/1‑149 (MQ=255)                                                               tCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTg                                                                                   <  1:248087/149‑1 (MQ=255)                                                                cACGTTCCTGGCGTGGGGGGGCCTGGCGGGGTGCGGGCAGGCCGAAGTGCGCGGGATGGGGTCGTCCTTGCGCAGGGTGCAGATCTCGTAGCCAGGGGTCGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTg                                                                                   <  1:89859/149‑1 (MQ=255)                                                                   gTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCaaa                                                                                                                       >  7:74911/1‑109 (MQ=255)                                                                   gTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCaaa                                                                                                                       <  8:74911/109‑1 (MQ=255)                                                                   gTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGa                                                                               >  5:41665/1‑149 (MQ=255)                                                                   gTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGa                                                                               <  7:157060/149‑1 (MQ=255)                                                                     tCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGAGCGCGGGATGGTGTGGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATg                                                                             >  1:217233/1‑149 (MQ=255)                                                                      ccTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATg                                                                             <  4:133323/148‑1 (MQ=255)                                                                         gTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATgg                                                                            >  8:179180/1‑146 (MQ=255)                                                                         gTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATgg                                                                            <  7:179180/146‑1 (MQ=255)                                                                            gTGGGGTTGCCTGTCGGGGTGCGGTCAGGCCGATGTGCGCGGGATGGTGTTGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGGCGAGAGCTTGCGGTCCTTGGTGATGGCGGTc                                                                       <  2:217233/148‑1 (MQ=255)                                                                                 gTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCg                                                                 >  4:64354/1‑149 (MQ=255)                                                                                    gCCTGTCGGGGTGCGGTAAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCGACTGGGCCGAGAGCTTGCGGAGCTTGGTGATGGCGGTCCAGCCGTCg                                                              >  2:175722/1‑149 (MQ=255)                                                                                       tGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑AGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGcc                                                            >  6:216842/1‑148 (MQ=255)                                                                                         tCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAg                                                         <  5:59167/149‑1 (MQ=255)                                                                                            gccgacaccaaggtgctgggcgacggctggaccgccatcaccaaggaccgcaagcTCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGc                                                                                               <  3:61294‑M1/53‑1 (MQ=255)                                                                                            gccgacaccaaggtgctgggcgacggctggaccgccatcaccaaggaccgcaagcTCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGc                                                                                               >  4:61294‑M1/56‑108 (MQ=255)                                                                                             ggTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCAcc                                                     <  3:64354/149‑1 (MQ=255)                                                                                                gCGGGCCGGCCGAAGGGCGCGGGCTTGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTg                                                  <  8:234038/149‑1 (MQ=255)                                                                                                 cGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTg                                                  <  3:125675/148‑1 (MQ=255)                                                                                                                       aTGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCAAGACG‑AATAAAAAAAAAAAATAATTTCCCACCGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGat                           >  8:219800/1‑149 (MQ=255)                                                                                                                                   ttGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGAt               >  1:129291/1‑149 (MQ=255)                                                                                                                                   ttGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGAt               >  3:87918/1‑149 (MQ=255)                                                                                                                                         aGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATGGTGaa         <  5:216842/149‑1 (MQ=255)                                                                                                                                            gTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATGGTGAAGGt      <  4:87918/149‑1 (MQ=255)                                                                                                                                             tGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATGGTGAAGGt      >  3:196597/1‑148 (MQ=255)                                                                                                                                             tGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATGGTGAAGGTc     <  1:8049/149‑1 (MQ=255)                                                                                                                                                 gATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAg                                                                    >  6:150949/1‑82 (MQ=255)                                                                                                                                                 gATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAg                                                                    <  5:150949/82‑1 (MQ=255)                                                                                                                                                 gATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATg              >  3:113294/1‑136 (MQ=255)                                                                                                                                                 gATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATg              >  3:139878/1‑136 (MQ=255)                                                                                                                                                 gATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATg              <  4:139878/136‑1 (MQ=255)                                                                                                                                                 gATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATg              <  4:113294/136‑1 (MQ=255)                                                                                                                                                 gATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCAAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATGGTGAAGGTCATg  >  6:362024/1‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                   GGGCCAGTTCCGCCTGGAACTGGCCACGGTCGAACAGCTCGGGGTCCACCTGGGGCATCGCGTCACGTTCCTGTCGTGGGGTGGCCTGTCGGGGTGCGGTCAGGCCGAAGTGCGCGGGATGGTGTCGTCCTTGCGCAGGGTGAAGATCTCGTAGCCAGTGG‑CGGTCACCACCAAAGTGTGTTCCCACTGGGCCGAGAGCTTGCGGTCCTTGGTGATGGCGGTCCAGCCGTCGCCCAGCACCTTGGTGTCGGCCTTGCCCTGGTTGATCATCGGCTCGATGGTGAAGGTCATG  >  NC_002947/1784019‑1784310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.