New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2414822 =58 (1.050)7 (0.130) 6/252 NT 10.9% coding (20/198 nt) PP_2115 hypothetical protein
?NC_002947 = 4908082 NA (NA)intergenic (‑58/‑224) PP_4317/PP_4318 hypothetical protein/transposase

AAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTG  >  NC_002947/2414677‑2414968
                                                                                                                                                 |                                                                                                                                                   
gatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggag                                                                                                                                                     >  1:67199‑M1/146‑146 (MQ=255)
gatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGc                                                                                                                                                    <  6:284157‑M1/2‑1 (MQ=255)
gatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGc                                                                                                                                                    <  3:198565‑M1/2‑1 (MQ=255)
gatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGc                                                                                                                                                    >  5:128484‑M1/146‑147 (MQ=255)
gatcttgatattgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGc                                                                                                                                                    <  6:25510‑M1/2‑1 (MQ=255)
aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCaa                                                                                                                                                  <  6:96547/149‑1 (MQ=32)
 aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAg                                                                                                                                                 <  5:223037/149‑1 (MQ=32)
  tcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGCAAgg                                                                                                                                                <  7:189879‑M1/6‑1 (MQ=255)
   cttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGCAAGGc                                                                                                                                               <  1:41785‑M1/7‑1 (MQ=255)
        tcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGc                                                                                                                                                    <  4:71052‑M1/2‑1 (MQ=255)
        tcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGc                                                                                                                                                    >  3:71052‑M1/138‑139 (MQ=255)
           cgcTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGCCACCTGCCTTCGCAAGGCCTGCGTTc                                                                                                                                       <  1:192309/149‑1 (MQ=17)
            gcTGCCATCATCCGGCCGCTGCGCTGCGCGCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTGGCAAGGCGTGCGTTCg                                                                                                                                      <  6:178339/149‑1 (MQ=11)
                   tcatcCGGCCCCTGCGCTGCGCTCCGGTGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcctcct                                                                                                                               <  3:169338/149‑1 (MQ=17)
                      tcCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTg                                                                                                                              >  6:167415/1‑147 (MQ=32)
                      tcCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGaa                                                                                                                            <  5:248771/149‑1 (MQ=32)
                           ccccTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcgc                                                                                                                       <  8:107994/149‑1 (MQ=32)
                           ccccTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcgc                                                                                                                       <  2:4831/149‑1 (MQ=32)
                            cccTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcgcg                                                                                                                      <  5:311031/149‑1 (MQ=32)
                              ctgcgctgcgCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGGCGCAGCGCGTGACGGGCCTCCCTGCCCGTCACCTGCCTTCGCCAGGCCTGCGGTGGGCCTCCGGCAGTggcg                                                                                                                      >  4:79173/1‑147 (MQ=11)
                                  gctgcgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatc                                                                                                                <  5:167415/149‑1 (MQ=32)
                                      cgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaa                                                                                                              <  1:44259/147‑1 (MQ=32)
                                        ctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatc                                                                                                          <  6:257319/149‑1 (MQ=32)
                                           cGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaa                                                                                                        <  3:337724/148‑1 (MQ=32)
                                              ggTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatc                                                                                                    <  2:24157/149‑1 (MQ=32)
                                              ggTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatc                                                                                                    <  3:19643/149‑1 (MQ=32)
                                                tCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaa                                                                                                  <  5:96143/149‑1 (MQ=32)
                                                 ccccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatc                                                                                                    >  3:120610/1‑146 (MQ=32)
                                                   ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaaga                                                                                                                  >  8:14127/1‑130 (MQ=32)
                                                   ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaaga                                                                                                                  <  7:14127/130‑1 (MQ=32)
                                                    cTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatc                                                                                              <  6:194928/149‑1 (MQ=32)
                                                    cTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagat                                                                                               >  2:282078/1‑148 (MQ=32)
                                                       aCTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaag                                                                                           <  2:279265/149‑1 (MQ=32)
                                                       aCTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaag                                                                                           <  2:137091/149‑1 (MQ=32)
                                                       aCTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaa                                                                                            <  1:169196/148‑1 (MQ=32)
                                                            ggCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaa                                                                                                              <  3:70716/125‑1 (MQ=32)
                                                            ggCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaa                                                                                                              >  4:70716/1‑125 (MQ=32)
                                                              ccTTGCTCCCGTCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGAACGTCACCTTCCTTCGCAAGGCCTGCGTTCGACCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaag                                                                                           <  3:215119/142‑1 (MQ=11)
                                                              ccTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTCCGTTAGACCTCCTGAAGTCGCGaagatcaagaacaagatcaagaaaaag                                                                                           >  4:215119/1‑137 (MQ=11)
                                                                  gcggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatc                                                                                                    <  2:102029‑M1/50‑1 (MQ=255)
                                                                  gcggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatc                                                                                                    >  1:102029‑M1/80‑129 (MQ=255)
                                                                   cTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGc                                                                                                                                           >  1:161459/1‑89 (MQ=33)
                                                                   cTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGc                                                                                                                                           <  2:161459/89‑1 (MQ=33)
                                                                    tCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCACGaagatcaagatcaagatcaagatcaagatcaagatc                                                                                  >  1:82610/1‑145 (MQ=17)
                                                                    ggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaag                                                                                     <  5:266508‑M1/65‑1 (MQ=255)
                                                                    ggaggcaggtgacgggcatggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaag                                                                                     >  6:266508‑M1/78‑142 (MQ=255)
                                                                      ccGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGTGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagat                                                                             >  1:195869/1‑148 (MQ=17)
                                                                       cGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatc                                                                            >  5:121519/1‑148 (MQ=32)
                                                                         gCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaag                                                                         <  2:77437/149‑1 (MQ=32)
                                                                         gCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatc                                                                            >  7:62595/1‑146 (MQ=32)
                                                                           aGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagat                                                                       <  6:121519/149‑1 (MQ=32)
                                                                           aGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGACCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga                                                                        >  8:38581/1‑148 (MQ=17)
                                                                              aCCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaa                                                                    <  6:71115/149‑1 (MQ=32)
                                                                                cgcgCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc                                                                      >  3:5471/1‑145 (MQ=32)
                                                                                  cgcCGAAGGCCCCATCCTGGGGCCTCAGCGCTTTACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaacatcaagatcaagatcaagatcaagaacaatctcaagat                                                                 >  6:40715/1‑148 (MQ=11)
                                                                                   gcCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc                                                                >  1:6765/1‑148 (MQ=32)
                                                                                       ggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc                                                                <  5:216662‑M1/86‑1 (MQ=255)
                                                                                       ggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaag                                                                   <  8:50792‑M1/83‑1 (MQ=255)
                                                                                       ggatgcccgtcaagcgctgaggccccaggatggggccttcggcgcggtcctgccgggaGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaag                                                                   >  7:50792‑M1/59‑141 (MQ=255)
                                                                                                  cTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGTGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgag                                                <  2:195869/148‑1 (MQ=255)
                                                                                                      ggCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaa                                           <  3:232892/149‑1 (MQ=255)
                                                                                                      ggCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTAGCAAGGCCTGCGTTCGGCCTCCTGTAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaa                                           <  3:228422/149‑1 (MQ=255)
                                                                                                       gCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTc                                                                                                                         <  7:276766/71‑1 (MQ=34)
                                                                                                       gCCTCAGCGCTTGACGGGCATCCATGACCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaag                                          <  7:38581/149‑1 (MQ=255)
                                                                                                        ccTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGTCCTGCTTTAGGCCTCCTTAAGTCGCGAAGATCAAGATCAAGATGAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaaga                                         <  5:40715/149‑1 (MQ=17)
                                                                                                             gcgcTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaagatcaag                                    <  4:5471/149‑1 (MQ=255)
                                                                                                              cgcTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagat                                                                                   >  5:38762/1‑102 (MQ=32)
                                                                                                              cgcTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagat                                                                                   <  6:38762/102‑1 (MQ=32)
                                                                                                                         cATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGatcaagatcgagatcaagatcaagatcgagatcaag                        <  8:62595/149‑1 (MQ=255)
                                                                                                                          aTCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGAtcaagatcgagatcaagatcaagatcgagatcaaga                       <  4:120610/149‑1 (MQ=255)
                                                                                                                          aTCCATGCCCGTCACCTGCCTTAGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAgatcaagatcgagatcaagatcaagatcgagatcaa                         >  3:139089/1‑147 (MQ=255)
                                                                                                                                 cccGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTgg                <  3:79173/149‑1 (MQ=255)
                                                                                                                                  ccGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTggg               >  6:248440/1‑149 (MQ=255)
                                                                                                                                  ccGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTggg               >  5:161875/1‑149 (MQ=255)
                                                                                                                                       aCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATAAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTg           >  1:78887/1‑148 (MQ=255)
                                                                                                                                         cTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGaaa        <  6:161875/149‑1 (MQ=255)
                                                                                                                                            ccTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgaga                                               <  6:82920/107‑1 (MQ=255)
                                                                                                                                            ccTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgaga                                               >  5:82920/1‑107 (MQ=255)
                                                                                                                                             cTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGttt            >  1:328046/1‑141 (MQ=255)
                                                                                                                                             cTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCg    <  7:16571/149‑1 (MQ=255)
                                                                                                                                             cTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCg    >  8:16571/1‑149 (MQ=255)
                                                                                                                                             cTTCGCAAGGCCTGCGTTCGGCCTACTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGttt            <  2:328046/141‑1 (MQ=255)
                                                                                                                                               gaGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTg  >  6:216662‑M1/3‑149 (MQ=255)
                                                                                                                                                 GCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAACCATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTg  >  1:282078‑M1/1‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
AAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTG  >  NC_002947/2414677‑2414968

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.