New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2775001 = | 54 (0.980) | 3 (0.060) | 3/246 | NT | 5.3% | coding (511/1353 nt) | PP_5521 | hypothetical protein |
? | NC_002947 | 2775048 = | 56 (1.050) | coding (464/1353 nt) | PP_5521 | hypothetical protein |
CGGCGCTCACCAGCAGTACTCGCTGGCCATCGGGGAAGGGGATCAGCGCGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGCACCACCTGGCCCTTGTCGTAAGGCAT > NC_002947/2774857‑2775148 | tgtcctgctgctggaagatggcagcctgctggcccgcatcggcatgccttacgacaagggccaggtggtgcgtatcgaccaccatggggtaaccccggtcatcggcatcgaacactttggccgctgccccgcgcggcgctacttCGccc < 8:180343‑M1/5‑1 (MQ=255) aCCAGCAGTACTCGCTGGCCATCGGGGAAGGGGATCAGCGCGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCa < 1:341088/147‑1 (MQ=255) agcagTACTCGCTGGCCATCGGGGAAGGGGATCAGCGCGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGt < 2:64696/149‑1 (MQ=255) cATCGGGGAAGGGGATCAGCGCGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCt > 8:60121/1‑147 (MQ=255) cATCGGGGAAGGGGATCAGCGCGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCt < 7:60121/147‑1 (MQ=255) aTCGGGGAAGGGGATCAGCGCGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCgg > 2:99724/1‑149 (MQ=255) aTCGGGGAAGGGGATCAGCGCGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCg < 1:311555/148‑1 (MQ=255) aTCGGGGAAGGGGATCAGCGCGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCg > 2:311555/1‑148 (MQ=255) ccggATCAGCGCGCTCGGTGTGCGCGGCAGGTCCAACGCATCGAACGGGAAACCAGGCGCCAACCCCACCATCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCACCCATCGGTAAAACGCACGCACACCGCAATGGCCa > 6:260838/3‑149 (MQ=255) ggcatgccttacgacaagggccaggtggtgcgtatcgaccaccatggggtaaccccggtcatcggcatcgaacactttggccgctgccccgcgcggcgctacttCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAgg > 2:174254‑M1/105‑148 (MQ=255) gATCAGCGCGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAggg > 2:286715/1‑149 (MQ=255) aGCGCGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGaa < 5:50223/149‑1 (MQ=255) gcgcGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTGGCCAATGCCGAGGGCgtgc < 5:131030/149‑4 (MQ=255) ggtGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTg < 5:259441/129‑1 (MQ=255) ggtGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTg > 6:259441/1‑129 (MQ=255) acaagggccaggtggtgcgtatcgaccaccatggggtaaccccggtcatcggcatcgaacactttggccgctgccccgcgcggcgctacttCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAggg < 6:344451‑M1/45‑1 (MQ=255) acaagggccaggtggtgcgtatcgaccaccatggggtaaccccggtcatcggcatcgaacactttggccgctgccccgcgcggcgctacttCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAggg > 5:344451‑M1/92‑136 (MQ=255) gtgtGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGcgccgc > 5:285437/1‑149 (MQ=255) ggcggcAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCggg > 6:341354/1‑149 (MQ=255) ggcggcAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCggg > 2:293542/1‑149 (MQ=255) ggcggcAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCggg > 2:274933/1‑149 (MQ=255) cAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCgg > 2:356851/1‑113 (MQ=255) cAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCgg < 1:356851/113‑1 (MQ=255) gTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCg < 7:332553/109‑1 (MQ=255) gTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCACAGCCATCGGTCACACGCACGCCCTCg > 8:332553/1‑109 (MQ=255) aaCGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCaaa > 2:77761/1‑149 (MQ=255) aaCGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCaaa < 5:341354/149‑1 (MQ=255) gAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGa > 3:239189/1‑149 (MQ=255) gAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGa > 2:199140/1‑149 (MQ=255) aaCGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGAt > 5:111830/1‑149 (MQ=255) cGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGc < 5:260838/149‑1 (MQ=255) gggTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGcc > 6:353030/1‑149 (MQ=255) cTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGAc < 8:191941/148‑1 (MQ=255) cTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGAc > 7:191941/1‑148 (MQ=255) ggcggcAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCgg > 6:102140/1‑149 (MQ=255) cggcAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGAATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCgggg < 1:286715/149‑1 (MQ=255) cAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTa > 8:190833/1‑149 (MQ=255) aCCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAATGTGTTCGATGCCGATGACCGGGGTTAcc < 1:199140/149‑1 (MQ=255) cccTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTAcccc < 1:293542/149‑1 (MQ=255) cccTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTAccc > 6:118677/1‑148 (MQ=255) cccTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTAccc > 1:324029/1‑148 (MQ=255) ccTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCa < 2:324029/149‑1 (MQ=255) cTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCcgcgcg < 4:49163/103‑1 (MQ=255) cTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCcgcgcg > 3:49163/1‑103 (MQ=255) cTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGcc < 2:129388/129‑1 (MQ=255) cTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGcc > 1:129388/1‑129 (MQ=255) aGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCAtggtg < 6:285437/149‑1 (MQ=255) ccGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTc > 8:181218/1‑148 (MQ=255) gTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGAt < 7:181218/149‑1 (MQ=255) ggccaggccaGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACg > 8:239609/1‑149 (MQ=255) gccaggccagGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGc < 7:190833/149‑1 (MQ=255) caggcGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGCaccaccc > 4:210561/1‑148 (MQ=255) gcGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGCACCACCTGGc < 5:102140/149‑1 (MQ=255) gTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGCACAACCTGGcc > 8:117590/1‑148 (MQ=255) aCTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGATGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGCACCACCTGGCCCTTGTc > 3:277978/1‑149 (MQ=255) aCTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGTGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGCACCACCTGGCCCTTGTc > 2:270647/1‑149 (MQ=255) aCTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGCACCACCTGGCCCTTGTc < 1:77761/149‑1 (MQ=255) cTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGCACCACCTGGCCCTTGTCg > 2:283281/1‑149 (MQ=255) cGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGCACCACCTGGCCCTTGTCGTAAg < 5:118677/149‑1 (MQ=255) ccgccCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGCACCACCTGGCCCTTGTCGTAAGGCAt < 4:239189/149‑1 (MQ=255) | CGGCGCTCACCAGCAGTACTCGCTGGCCATCGGGGAAGGGGATCAGCGCGGTCGGTGTGGGCGGCAGGTCGAACGGCTCGAACGGGTAACCTGGCGGCAACCCCTCCAGCCCCGTGGGCCAGGCCAGGCGTTGCACTTGCGGGCCGCCCCAGCCATCGGTCACACGCACGCCCTCGGCATTGGCCAGGGCGAAGTAGCGCCGCGCGGGGCAGCGGCCAAAGTGTTCGATGCCGATGACCGGGGTTACCCCATGGTGGTCGATACGCACCACCTGGCCCTTGTCGTAAGGCAT > NC_002947/2774857‑2775148 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |